RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 RGS11O94810 467 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 CD3GP09693 182 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 HIST1H1DP16402 221 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 HLA-DRB3P79483 266 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 C11orf88Q6PI97 169 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 LYG1Q8N1E2 194 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 LGALS14Q8TCE9 139 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 ABHD14AQ9BUJ0 271 aa14.96□□□□□ -0.01
PRPF40B-206ENST00000547764 IGHV3-72A0A0B4J1Y9 119 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 IGKV1D-33P01593 117 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 IGKV1-33P01594 117 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 SCTP09683 121 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 SMIM18P0DKX4 95 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 LSM3P62310 102 aaKnown RBP14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 MRPS15P82914 257 aaKnown RBP14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 HES1Q14469 280 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 IDNKQ5T6J7 187 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 SERTAD4Q9NUC0 356 aa14.95□□□□□ -0.02
PRPF40B-206ENST00000547764 SERPINE3A8MV23 424 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 TRDCB7Z8K6 153 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 AMY1AP04745 511 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 AMY2AP04746 511 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 TMEM11P17152 192 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 HNF4GQ14541 408 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 TGIF2LXQ8IUE1 241 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 ODF3L1Q8IXM7 274 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 OR2AK2Q8NG84 335 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 OR5H6Q8NGV6 325 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 SLC23A1Q9UHI7 598 aa14.94□□□□□ -0.02
PRPF40B-206ENST00000547764 TRRAPQ9Y4A5 3859 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 TXNL1O43396 289 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 LANCL1O43813 399 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 LPLP06858 475 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 FCGR3AP08637 254 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 VSIG10L2P0DP72 767 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 RPS19P39019 145 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 SCAND1P57086 179 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 ARFRP1Q13795 201 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 EBI3Q14213 229 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 CDNFQ49AH0 187 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 ABCA11PQ4W5N1 156 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 KLHDC1Q8N7A1 406 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 OR13F1Q8NGS4 319 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 FUNDC2Q9BWH2 189 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 PARP12Q9H0J9 701 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 RHBDL2Q9NX52 303 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 OR1A1Q9P1Q5 309 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 ELF5Q9UKW6 265 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 MOB4Q9Y3A3 225 aa14.93□□□□□ -0.02
PRPF40B-206ENST00000547764 IGKV1-6A0A0C4DH72 117 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 SH2D7A6NKC9 451 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ZNF736B4DX44 427 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 M0QZK8 103 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ST8SIA5O15466 376 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ZBTB25P24278 435 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 CD1BP29016 333 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 CEACAM6P40199 344 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ARL6IP1Q15041 203 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 TMEM95Q3KNT9 176 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ARSJQ5FYB0 599 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 IZUMO1Q8IYV9 350 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 MAFIPQ8WZ33 124 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 EAF1Q96JC9 268 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 IFI27L2Q9H2X8 130 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ZNF230Q9UIE0 474 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 ETV7Q9Y603 341 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 FBN3Q75N90 2809 aa14.92□□□□□ -0.02
PRPF40B-206ENST00000547764 FABP7O15540 132 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 HSPA12AO43301 675 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 SCGNO76038 276 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 VDAC2P45880 294 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 OR3A3P47888 321 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 HERPUD1Q15011 391 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 CROCCP3Q8IVE0 287 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 OR4A4PQ8NGN8 299 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 OR2T10Q8NGZ9 312 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 SLC25A38Q96DW6 304 aa14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 RBMXL1Q96E39 390 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-206ENST00000547764 SAA2-SAA4A0A096LPE2 208 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 ITGB1BP1O14713 200 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 TMEM127O75204 238 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 GSTT2P0CG29 244 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 GSTT2BP0CG30 244 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 SAA2P0DJI9 122 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 TALDO1P37837 337 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 NCS1P62166 190 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 KIR2DS1Q14954 304 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 PRR31Q5SQ13 230 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 HACD4Q5VWC8 232 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 ZNF833PQ6ZTB9 187 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 Q8N6K4 173 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 AGMATQ9BSE5 352 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 WNT10AQ9GZT5 417 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 C11orf54Q9H0W9 315 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 SPATA2Q9UM82 520 aa14.9□□□□□ -0.02
PRPF40B-206ENST00000547764 FGF16O43320 207 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 PEX14O75381 377 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 MOSP00540 346 aa14.89□□□□□ -0.03
PRPF40B-206ENST00000547764 GSTP1P09211 210 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms