RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SLC23A1Q9UHI7 598 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 CCDC160A6NGH7 325 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 FABP7O15540 132 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 XRCC3O43542 346 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 LPLP06858 475 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 HKR1P10072 659 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 DTYMKP23919 212 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 CEACAM6P40199 344 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 LYG1Q8N1E2 194 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 OR4A4PQ8NGN8 299 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 TAF15Q92804 592 aaKnown RBP eCLIP13.55□□□□□ -0.24
LTBR-215ENST00000546296 ABHD14AQ9BUJ0 271 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 RAB18Q9NP72 206 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 PITPNC1Q9UKF7 332 aa13.55□□□□□ -0.24
LTBR-215ENST00000546296 TMEM89A2RUT3 159 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 HSD17B6O14756 317 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 BET1O15155 118 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 GSTT2P0CG29 244 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 GSTT2BP0CG30 244 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 CD24P25063 80 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 REG1BP48304 166 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 RPL15P61313 204 aaKnown RBP13.54□□□□□ -0.24
LTBR-215ENST00000546296 DIAPH2-AS1Q14236 149 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 SRSF7Q16629 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
LTBR-215ENST00000546296 LY6G6FQ5SQ64 297 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 TMEM69Q5SWH9 247 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 LIAT1Q6ZQX7 453 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 MOB3BQ86TA1 216 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 CAPSLQ8WWF8 208 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 C1RLQ9NZP8 487 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 OR1A1Q9P1Q5 309 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 TCF19Q9Y242 345 aa13.54□□□□□ -0.24
LTBR-215ENST00000546296 A6NDX4 124 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 TIMM23O14925 209 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 HPGDSO60760 199 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 APOA1P02647 267 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 FAM106CPP0CH98 169 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 FOXL1Q12952 345 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 TMEM219Q86XT9 240 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 DRAM1Q8N682 238 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 OR10J5Q8NHC4 309 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 EDARADDQ8WWZ3 215 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 ISOC1Q96CN7 298 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 CMTM3Q96MX0 182 aa13.53□□□□□ -0.24
LTBR-215ENST00000546296 IGKV1-6A0A0C4DH72 117 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 FAM25AB3EWG3 89 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 FAM25CB3EWG5 89 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 FAM25GB3EWG6 89 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 SSX5O60225 188 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 EIF4EP06730 217 aaKnown RBP13.52□□□□□ -0.25
LTBR-215ENST00000546296 RAG2P55895 527 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 ZNF816Q0VGE8 651 aaPredicted RBP13.52□□□□□ -0.25
LTBR-215ENST00000546296 IGSF11Q5DX21 431 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 C12orf54Q6X4T0 127 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 Q6ZS49 121 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 TGIF2LXQ8IUE1 241 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 OR4F5Q8NH21 305 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 OR56B4Q8NH76 319 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 RTN4IP1Q8WWV3 396 aaPredicted RBP13.52□□□□□ -0.25
LTBR-215ENST00000546296 GINS4Q9BRT9 223 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 MRPS7Q9Y2R9 242 aaKnown RBP13.52□□□□□ -0.25
LTBR-215ENST00000546296 CEPT1Q9Y6K0 416 aa13.52□□□□□ -0.25
LTBR-215ENST00000546296 IGHV1-3A0A0C4DH29 117 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 A0A1W2PPI3 338 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 H3BMQ9 156 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 ST8SIA5O15466 376 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 PTHLHP12272 177 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 ELK1P19419 428 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 TAS2R20P59543 309 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 HES1Q14469 280 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 HERPUD1Q15011 391 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 CCBE1Q6UXH8 406 aaPredicted RBP13.51□□□□□ -0.25
LTBR-215ENST00000546296 ST6GALNAC6Q969X2 333 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 PARP12Q9H0J9 701 aaKnown RBP13.51□□□□□ -0.25
LTBR-215ENST00000546296 C11orf54Q9H0W9 315 aaPredicted RBP13.51□□□□□ -0.25
LTBR-215ENST00000546296 BEX1Q9HBH7 125 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 RDH8Q9NYR8 311 aa13.51□□□□□ -0.25
LTBR-215ENST00000546296 IGKV1D-8A0A087WSZ0 117 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 ITGB1BP1O14713 200 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 RGS5O15539 181 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 TXNL1O43396 289 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 LANCL1O43813 399 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 CHST1O43916 411 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 NDUFA7O95182 113 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 SNRNP70P08621 437 aaKnown RBP13.5□□□□□ -0.25
LTBR-215ENST00000546296 CBX5P45973 191 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 OR3A3P47888 321 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 ZNF137PP52743 207 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 RELBQ01201 579 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 OR4C13Q8NGP0 309 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 SPATA3Q8NHX4 192 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 DYNC2LI1Q8TCX1 351 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 S1PR3Q99500 378 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 CABLES2Q9BTV7 478 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 NPFFR1Q9GZQ6 430 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms