RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 DIMT1Q9UNQ2 313 aaKnown RBP9.69□□□□□ -0.86
COPS7A-221ENST00000546229 MRPS28Q9Y2Q9 187 aaKnown RBP9.69□□□□□ -0.86
COPS7A-221ENST00000546229 SAA2-SAA4A0A096LPE2 208 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 TRIM64CA6NLI5 447 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 NBR2O15453 112 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 GLAP06280 429 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 FRMD6-AS1P0C7T7 363 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 SAA2P0DJI9 122 aaPredicted RBP9.68□□□□□ -0.86
COPS7A-221ENST00000546229 SPNP16150 400 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 PPP1CCP36873 323 aaKnown RBP9.68□□□□□ -0.86
COPS7A-221ENST00000546229 OR3A3P47888 321 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 SLURP1P55000 103 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 HTD2P86397 168 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 HMGN3Q15651 99 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 TRAT1Q6PIZ9 186 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 GLIPR1L1Q6UWM5 242 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 ZNF429Q86V71 674 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 ZFP41Q8N8Y5 198 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 NEK7Q8TDX7 302 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 OR5B12Q96R08 314 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 OR14A2Q96R54 314 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 C9orf16Q9BUW7 83 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 BANF2Q9H503 90 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 PARP11Q9NR21 331 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 BABAM2Q9NXR7 383 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 TRAPPC2LQ9UL33 140 aa9.68□□□□□ -0.86
COPS7A-221ENST00000546229 IGHV4OR15-8A0A075B7B6 117 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 A0A087WW49 117 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 MCRIP1C9JLW8 97 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 DYNC1I1O14576 645 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 OVOL1O14753 267 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 YPEL1O60688 119 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 MGMTP16455 207 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 GPR176Q14439 515 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 LAIR2Q6ISS4 152 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 ACSM6Q6P461 480 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 OVCH2Q7RTZ1 564 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 CDH26Q8IXH8 852 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 PRR18Q8N4B5 295 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 DERL3Q96Q80 235 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 YPEL2Q96QA6 119 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
COPS7A-221ENST00000546229 EDA2RQ9HAV5 297 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 OR2S2Q9NQN1 319 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 PEX16Q9Y5Y5 336 aa9.67□□□□□ -0.86
COPS7A-221ENST00000546229 LCE6AA0A183 80 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 PDCD6O75340 191 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 LGALS1P09382 135 aaKnown RBP9.66□□□□□ -0.86
COPS7A-221ENST00000546229 GP9P14770 177 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 SSBP2P81877 361 aaPredicted RBP9.66□□□□□ -0.86
COPS7A-221ENST00000546229 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 ZNF880Q6PDB4 577 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 Q8N1Y9 231 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 PQLC1Q8N2U9 271 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 CASTOR1Q8WTX7 329 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 SULT4A1Q9BR01 284 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 SELENOIQ9C0D9 397 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 RAB9BQ9NP90 201 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 GAB2Q9UQC2 676 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
COPS7A-221ENST00000546229 A0A1W2PPK0 400 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 UBE2QL1A1L167 161 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 FCN1O00602 326 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 PROP1O75360 226 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 LY86O95711 162 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 NAPSAO96009 420 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 MAS1P04201 325 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 FUT3P21217 361 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 CX3CL1P78423 397 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 LRRC36Q1X8D7 754 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 AWAT2Q6E213 333 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 CD200R1LQ6Q8B3 271 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 TMPRSS11AQ6ZMR5 421 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 SVOPQ8N4V2 548 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 JAGN1Q8N5M9 183 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 ARPC1AQ92747 370 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 S100A13Q99584 98 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 AGMATQ9BSE5 352 aa9.65□□□□□ -0.86
COPS7A-221ENST00000546229 FOXA2Q9Y261 457 aaPredicted RBP9.65□□□□□ -0.86
COPS7A-221ENST00000546229 EXOSC1Q9Y3B2 195 aaKnown RBP9.65□□□□□ -0.86
COPS7A-221ENST00000546229 A8MZ25 164 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 LINC01619G3V211 115 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 H0YJW9 148 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 RRHO14718 337 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 SAP30O75446 220 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 CT45A6P0DMU7 189 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 CT45A5P0DMU8 189 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 CT45A7P0DMV0 189 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 CD37P11049 281 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 ECSCRQ19T08 205 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 FAM27D1Q5T7N8 215 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
COPS7A-221ENST00000546229 LIN54Q6MZP7 749 aa9.64□□□□□ -0.87
COPS7A-221ENST00000546229 TMEM65Q6PI78 240 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms