RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 PPP1CCP36873 323 aaKnown RBP9.46□□□□□ -0.9
YBX3-217ENST00000546164 REG1BP48304 166 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 C5orf24Q7Z6I8 188 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 Q8N6K4 173 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 OR10R2Q8NGX6 335 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 RAB3CQ96E17 227 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 CMSS1Q9BQ75 279 aaKnown RBP9.46□□□□□ -0.9
YBX3-217ENST00000546164 CHCHD6Q9BRQ6 235 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.9
YBX3-217ENST00000546164 Q9N2K0 584 aa9.46□□□□□ -0.9
YBX3-217ENST00000546164 A0A0B4J203 849 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 METTL21EPA6NDL7 271 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 SERPINE3A8MV23 424 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 MFNGO00587 321 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 IGKV1D-33P01593 117 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 IGKV1-33P01594 117 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
YBX3-217ENST00000546164 HIST1H1DP16402 221 aaKnown RBP9.45□□□□□ -0.9
YBX3-217ENST00000546164 TMEM11P17152 192 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 GADD45AP24522 165 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 VDAC2P45880 294 aaPredicted RBP9.45□□□□□ -0.9
YBX3-217ENST00000546164 SCAND1P57086 179 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 HLA-DRB3P79483 266 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 ARL6IP1Q15041 203 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 MOGAT2Q3SYC2 334 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 TIMM50Q3ZCQ8 353 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 ABCA11PQ4W5N1 156 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
YBX3-217ENST00000546164 SFXN4Q6P4A7 337 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 MOB3BQ86TA1 216 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 ODF3L1Q8IXM7 274 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 OR2AK2Q8NG84 335 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 VCX3AQ9NNX9 186 aa9.45□□□□□ -0.9
YBX3-217ENST00000546164 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.45□□□□□ -0.9
YBX3-217ENST00000546164 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 SMIM30A4D0T7 59 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 TMEM127O75204 238 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 VSIG10L2P0DP72 767 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 SDC2P34741 201 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 HES1Q14469 280 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 C2orf68Q2NKX9 166 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 TMEM95Q3KNT9 176 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 FAM71F2Q6NXP2 309 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 ZNF833PQ6ZTB9 187 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 LYG1Q8N1E2 194 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 OR8H1Q8NGG4 311 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 OR2T10Q8NGZ9 312 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 SETD6Q8TBK2 473 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 IL1F10Q8WWZ1 152 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 EAF1Q96JC9 268 aaPredicted RBP9.44□□□□□ -0.9
YBX3-217ENST00000546164 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 IFI27L2Q9H2X8 130 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 MMP27Q9H306 513 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 GHITMQ9H3K2 345 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 DAPK2Q9UIK4 370 aa9.44□□□□□ -0.9
YBX3-217ENST00000546164 IGHV3-72A0A0B4J1Y9 119 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 LOC100506127A0A0U1RQW1 187 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 TRDCB7Z8K6 153 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 RRP9O43818 475 aaKnown RBP9.43□□□□□ -0.9
YBX3-217ENST00000546164 PEX14O75381 377 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 FBXO24O75426 580 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 SCGNO76038 276 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 DIRAS3O95661 229 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 MOSP00540 346 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 CD3GP09693 182 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 ZBTB25P24278 435 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
YBX3-217ENST00000546164 LSAMPQ13449 338 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
YBX3-217ENST00000546164 ARSJQ5FYB0 599 aaPredicted RBP9.43□□□□□ -0.9
YBX3-217ENST00000546164 Q6ZS49 121 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 EDARADDQ8WWZ3 215 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 YIPF6Q96EC8 236 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 AGMATQ9BSE5 352 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 TOLLIPQ9H0E2 274 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 RNF167Q9H6Y7 350 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 PIPOXQ9P0Z9 390 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 SLC23A1Q9UHI7 598 aa9.43□□□□□ -0.9
YBX3-217ENST00000546164 SAA2-SAA4A0A096LPE2 208 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 IGKV1-6A0A0C4DH72 117 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 ZNF736B4DX44 427 aaPredicted RBP9.42□□□□□ -0.9
YBX3-217ENST00000546164 FCGR3AP08637 254 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 SCTP09683 121 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 CLEC2LP0C7M8 214 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 SAA2P0DJI9 122 aaPredicted RBP9.42□□□□□ -0.9
YBX3-217ENST00000546164 SNRPBP14678 240 aaKnown RBP9.42□□□□□ -0.9
YBX3-217ENST00000546164 GNB3P16520 340 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 SERPINB10P48595 397 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 HNF4GQ14541 408 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 KIR2DS1Q14954 304 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 OR4A4PQ8NGN8 299 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 LGALS14Q8TCE9 139 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 NABP2Q9BQ15 211 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 ZNF251Q9BRH9 671 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 CABLES2Q9BTV7 478 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms