RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 OR11H6Q8NGC7 330 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 RFESDQ8TAC1 157 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 MSI2Q96DH6 328 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 AKR1E2Q96JD6 320 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 SLC6A7Q99884 636 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF2Q9BSG1 426 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 CLEC7AQ9BXN2 247 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 C11orf54Q9H0W9 315 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 AMMECR1Q9Y4X0 333 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 FAM240BA0A1B0GVZ2 78 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 TOX4O94842 621 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 FOSL1P15407 271 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 IL3RAP26951 378 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 PRRX1P54821 245 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 ARF6P62330 175 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 IDO2Q6ZQW0 420 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 SLC25A48Q6ZT89 311 aaKnown RBP13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 SLC38A6Q8IZM9 456 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 Q8N7P7 452 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF439Q8NDP4 499 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 OR51S1Q8NGJ8 323 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 OR56B4Q8NH76 319 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 ZFAND1Q8TCF1 268 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 ABHD14AQ9BUJ0 271 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 LPAR2Q9HBW0 351 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 MMP26Q9NRE1 261 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 HIF1ANQ9NWT6 349 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 PIPOXQ9P0Z9 390 aa13.11□□□□□ -0.31
PRPF40A-212ENST00000545856 OMGP23515 440 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 S100GP29377 79 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF137PP52743 207 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 RAG2P55895 527 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 UBE2MP61081 183 aaKnown RBP13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 OR52L2PQ8NGH6 319 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 OR4D10Q8NGI6 311 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 OR1A1Q9P1Q5 309 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 ACANP16112 2415 aa13.1□□□□□ -0.31
PRPF40A-212ENST00000545856 IGHV2-26A0A0B4J1V2 119 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 J3QR06 171 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 TOR1AO14656 332 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 TXNL1O43396 289 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 NDUFB6O95139 128 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 TGFAP01135 160 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 IGLV1-47P01700 117 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 NFYBP25208 207 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 BTCP35070 178 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 PPP1CCP36873 323 aaKnown RBP13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 UBE2E1P51965 193 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 AADACL3Q5VUY0 350 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF626Q68DY1 528 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 C11orf88Q6PI97 169 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 VMO1Q7Z5L0 202 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 C18orf12Q96KH6 178 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 AGMATQ9BSE5 352 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 TBL2Q9Y4P3 447 aaKnown RBP13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 NUBP2Q9Y5Y2 271 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 CSPG4Q6UVK1 2322 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 NAV3Q8IVL0 2385 aa13.09□□□□□ -0.31
PRPF40A-212ENST00000545856 PIGBOS1A0A0B4J2F0 54 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 OOSP1A8MZH6 123 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 RAB29O14966 203 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 B3GALNT1O75752 331 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 CTSDP07339 412 aaPredicted RBP13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 AADACP22760 399 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 NFYAP23511 347 aaPredicted RBP13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 TAS2R31P59538 309 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 MIDNQ504T8 468 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 MINOS1Q5TGZ0 78 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 CMTM1Q8IZ96 169 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 ABHD12Q8N2K0 398 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF645Q8N7E2 425 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 OR13C8Q8NGS7 320 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 SUCNR1Q9BXA5 334 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 MMP28Q9H239 520 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 RBM7Q9Y580 266 aaKnown RBP13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 MINOS1-NBL1R4GNA1 71 aa13.08□□□□□ -0.31
PRPF40A-212ENST00000545856 OR5H14A6NHG9 310 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 ODF3BA8MYP8 253 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 CD5LO43866 347 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 MMP23AO75900 390 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 CEACAM3P40198 252 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 RND3P61587 244 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 TAGLNQ01995 201 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 GNMTQ14749 295 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 HLA-DRB5Q30154 266 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 FAAP20Q6NZ36 180 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 FAHD2BQ6P2I3 314 aaPredicted RBP13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 PLET1Q6UQ28 207 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 TCTEX1D1Q8N7M0 179 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 CCDC71LQ8N9Z2 235 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 FAHD2AQ96GK7 314 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 S1PR3Q99500 378 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms