RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 C1orf210Q8IVY1 113 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 OR5A2Q8NGI9 324 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 METTL1Q9UBP6 276 aaKnown RBP12.73□□□□□ -0.37
USP28-214ENST00000545540 CLN8Q9UBY8 286 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 H0Y980 276 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 SYNGR2O43760 224 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 PMELP40967 661 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 CD200P41217 278 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 GNG3P63215 75 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 AESQ08117 197 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 ZNF585BQ52M93 769 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 FAM185AQ8N0U4 392 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 OR5D13Q8NGL4 314 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 OR10D4PQ8NGN7 298 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 OR1L1Q8NH94 360 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 TCTEX1D2Q8WW35 142 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 DCTN5Q9BTE1 182 aa12.73□□□□□ -0.37
USP28-214ENST00000545540 HLA-DRB3P79483 266 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 SCCPDHQ8NBX0 429 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 LFNGQ8NES3 379 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 GGACTQ9BVM4 153 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 PSPNO60542 156 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 TLE4Q04727 773 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 SRSF6Q13247 344 aaKnown RBP12.72□□□□□ -0.37
USP28-214ENST00000545540 PYY3Q5JQD4 70 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 RPUSD4Q96CM3 377 aaKnown RBP12.72□□□□□ -0.37
USP28-214ENST00000545540 SLC25A22Q9H936 323 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 B4GALT7Q9UBV7 327 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 PPIHO43447 177 aaKnown RBP12.72□□□□□ -0.37
USP28-214ENST00000545540 RAB2AP61019 212 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 RTP5Q14D33 572 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 FIP1L1Q6UN15 594 aaKnown RBP12.72□□□□□ -0.37
USP28-214ENST00000545540 H1FOOQ8IZA3 346 aaPredicted RBP12.72□□□□□ -0.37
USP28-214ENST00000545540 TVP23CQ96ET8 276 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 ZNF251Q9BRH9 671 aa12.72□□□□□ -0.37
USP28-214ENST00000545540 PLCE1Q9P212 2302 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BKO60814 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BJP06899 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 EGR1P18146 543 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BOP23527 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BBP33778 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BDP58876 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BCP62807 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 ARG2P78540 354 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
USP28-214ENST00000545540 RCC1LQ96I51 464 aaKnown RBP12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 TACC2O95359 2948 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 IGKV1D-33P01593 117 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 IGKV1-33P01594 117 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 OR3A1P47881 315 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 ZNF573Q86YE8 665 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 DRAM1Q8N682 238 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 TOLLIPQ9H0E2 274 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 RBKSQ9H477 322 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 TUBA4BQ9H853 241 aa12.71□□□□□ -0.37
USP28-214ENST00000545540 SEBOXQ9HB31 216 aaPredicted RBP12.71□□□□□ -0.37
USP28-214ENST00000545540 PKDREJQ9NTG1 2253 aa12.71□□□□□ -0.38
USP28-214ENST00000545540 LNP1A1A4G5 178 aa12.71□□□□□ -0.38
USP28-214ENST00000545540 SOD3P08294 240 aa12.71□□□□□ -0.38
USP28-214ENST00000545540 SMIM6P0DI80 62 aa12.71□□□□□ -0.38
USP28-214ENST00000545540 RPL30P62888 115 aaKnown RBP12.71□□□□□ -0.38
USP28-214ENST00000545540 FGFRL1Q8N441 504 aa12.71□□□□□ -0.38
USP28-214ENST00000545540 OR51I2Q9H344 312 aa12.71□□□□□ -0.38
USP28-214ENST00000545540 ABHD14BQ96IU4 210 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 RHOVQ96L33 236 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 MSL2Q9HCI7 577 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
USP28-214ENST00000545540 IGKV3D-15A0A087WSY6 115 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 S100A8P05109 93 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 ADIRFQ15847 76 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 Q6P435 159 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 SSX9Q7RTT3 188 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 FRZBQ92765 325 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 YPEL4Q96NS1 127 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 TECTBQ96PL2 329 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 OBP2BQ9NPH6 170 aa12.7□□□□□ -0.38
USP28-214ENST00000545540 CYC1P08574 325 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 PGA5P0DJD9 388 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 TDGF1P13385 188 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 S100GP29377 79 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 IL24Q13007 206 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 Q8NFD4 153 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 SNX22Q96L94 193 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 OR2D2Q9H210 308 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 CLEC18AA5D8T8 446 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 FABP4P15090 132 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 FABP6P51161 128 aa12.69□□□□□ -0.38
USP28-214ENST00000545540 PRAMEF6Q5VXH4 476 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms