RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FGF23Q9GZV9 251 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 GOLPH3Q9H4A6 298 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PLEKHA1Q9HB21 404 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 FAM60AQ9NP50 221 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SDHAF2Q9NX18 166 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 VAPAQ9P0L0 249 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF222Q9UK12 451 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 CFL2Q9Y281 166 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ACOT9Q9Y305 439 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PCYT1BQ9Y5K3 369 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 HEATR1Q9H583 2144 aaKnown RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 USF3Q68DE3 2245 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 CUBNO60494 3623 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 MED12LQ86YW9 2145 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 TRGV5A0A0B4J1U4 118 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 FAM240AA0A1B0GVK7 77 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 C5orf63A6NC05 138 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 M0R1B8 84 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 ENSAO43768 121 aaKnown RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 NDUFS6O75380 124 aaKnown RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF189O75820 626 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 UPK1BO75841 260 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 GLSO94925 669 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 IGKV1D-16P01601 117 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 STATHP02808 62 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 SLC35G6P0C7Q6 338 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 OR56A5P0C7T3 313 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 UCHL3P15374 230 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 PGAM1P18669 254 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 CMPK1P30085 196 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 MIPP30301 263 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 RGS6P49758 472 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 OR2B6P58173 313 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 PNOCQ13519 176 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 PAFAH1B3Q15102 231 aaKnown RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 USF2Q15853 346 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 DEFB116Q30KQ4 102 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 C6orf99Q4VX62 202 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 SMUG1Q53HV7 270 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 MPV17L2Q567V2 206 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 UGT2A3Q6UWM9 527 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 GLT6D1Q7Z4J2 308 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 CRLF3Q8IUI8 442 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 RIMKLAQ8IXN7 391 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 SLC7A5P1Q8MH63 180 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 PGAM4Q8N0Y7 254 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 CYP4Z2PQ8N1L4 340 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 C3orf56Q8N813 242 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 COQ8AQ8NI60 647 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 TMEM239Q8WW34 195 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 RAD51AP1Q96B01 352 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 FLYWCH2Q96CP2 140 aaKnown RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF285Q96NJ3 590 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 MCEEQ96PE7 176 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 VAT1Q99536 393 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 COPS4Q9BT78 406 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 SNRNP25Q9BV90 132 aaKnown RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 REG4Q9BYZ8 158 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 PLA2G12AQ9BZM1 189 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 DRC3Q9H069 523 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 TOLLIPQ9H0E2 274 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 OR52A5Q9H2C5 316 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 HMG20AQ9NP66 347 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 CYB5R1Q9UHQ9 305 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF223Q9UK11 482 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-222ENST00000545308 WIF1Q9Y5W5 379 aa2.59□□□□□ -1.99
SNHG1-222ENST00000545308 CR1P17927 2039 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 TRAV8-4A0A0B4J246 113 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 A0A1W2PP18 115 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 H0YJW9 148 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 J3QT63 122 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 hCG_2039718K7EN88 272 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 TAAR5O14804 337 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 PFDN6O15212 129 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 TCF21O43680 179 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 NSA2O95478 260 aaKnown RBP2.58□□□□□ -2
SNHG1-222ENST00000545308 CD8AP01732 235 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 P01737 135 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 MAGP20916 626 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 RANBP1P43487 201 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 DNASE1L1P49184 302 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 OR4D2P58180 307 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 MTPNP58546 118 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 UBE2KP61086 200 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 BIKQ13323 160 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 GUSBP1Q15486 140 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 TAF1AQ15573 450 aaPredicted RBP2.58□□□□□ -2
SNHG1-222ENST00000545308 CLEC12BQ2HXU8 276 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 DEFB110Q30KQ9 67 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 SAXO2Q658L1 398 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 ZNF470Q6ECI4 717 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 ERICH5Q6P6B1 374 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 OPN5Q6U736 354 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
SNHG1-222ENST00000545308 CALHM1Q8IU99 346 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 KRTAP11-1Q8IUC1 163 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 LGI3Q8N145 548 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 ZCCHC24Q8N2G6 241 aaKnown RBP2.58□□□□□ -2
SNHG1-222ENST00000545308 TBC1D19Q8N5T2 526 aa2.58□□□□□ -2
SNHG1-222ENST00000545308 CYB561A3Q8NBI2 242 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms