RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 DCSTAMPQ9H295 470 aa15.34■□□□□ 0.05
DDX55-211ENST00000544429 C16orf95Q9H693 158 aa15.34■□□□□ 0.05
DDX55-211ENST00000544429 RAB18Q9NP72 206 aa15.34■□□□□ 0.05
DDX55-211ENST00000544429 PITPNC1Q9UKF7 332 aa15.34■□□□□ 0.05
DDX55-211ENST00000544429 TMEM235A6NFC5 223 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 HSD17B6O14756 317 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 SSX5O60225 188 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 RGS11O94810 467 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 CRYBA1P05813 215 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 ARHGDIBP52566 201 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 RAG2P55895 527 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 UBE2NLQ5JXB2 153 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 DHRS7BQ6IAN0 325 aaPredicted RBP15.33■□□□□ 0.04
DDX55-211ENST00000544429 THNSL2Q86YJ6 484 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 OR4A4PQ8NGN8 299 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 RTN4IP1Q8WWV3 396 aaPredicted RBP15.33■□□□□ 0.04
DDX55-211ENST00000544429 IL1F10Q8WWZ1 152 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 AGMATQ9BSE5 352 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 ABHD14AQ9BUJ0 271 aa15.33■□□□□ 0.04
DDX55-211ENST00000544429 ZNF230Q9UIE0 474 aaPredicted RBP15.33■□□□□ 0.04
DDX55-211ENST00000544429 IGHV1-3A0A0C4DH29 117 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 TIMM23O14925 209 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 FABP7O15540 132 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 XRCC3O43542 346 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 GAPDHP04406 335 aaKnown RBP15.32■□□□□ 0.04
DDX55-211ENST00000544429 MDKP21741 143 aaPredicted RBP15.32■□□□□ 0.04
DDX55-211ENST00000544429 ZBTB25P24278 435 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 MNDAP41218 407 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 KIR2DS4P43632 304 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 RORCP51449 518 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 TMBIM6P55061 237 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 MRPS15P82914 257 aaKnown RBP15.32■□□□□ 0.04
DDX55-211ENST00000544429 PITPNAQ00169 270 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 ARFRP1Q13795 201 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 KIR2DS1Q14954 304 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 OR4F5Q8NH21 305 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 RAB2BQ8WUD1 216 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 CMTM3Q96MX0 182 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 PARP12Q9H0J9 701 aaKnown RBP15.32■□□□□ 0.04
DDX55-211ENST00000544429 IFI27L2Q9H2X8 130 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 RANBP3Q9H6Z4 567 aaPredicted RBP15.32■□□□□ 0.04
DDX55-211ENST00000544429 OR1A1Q9P1Q5 309 aa15.32■□□□□ 0.04
DDX55-211ENST00000544429 IGKV1D-8A0A087WSZ0 117 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 A0A1B0GUS0 222 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 LANCL1O43813 399 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 GSTT2P0CG29 244 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 GSTT2BP0CG30 244 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 CD24P25063 80 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 IL3RAP26951 378 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 EBI3Q14213 229 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 TMEM219Q86XT9 240 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 CLVS1Q8IUQ0 354 aaPredicted RBP15.31■□□□□ 0.04
DDX55-211ENST00000544429 DRAM1Q8N682 238 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 SAMD12Q8N8I0 201 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 LINC01006Q8NI28 216 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 NUDCD2Q8WVJ2 157 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 ACOT12Q8WYK0 555 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 DIABLOQ9NR28 239 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 SLC23A1Q9UHI7 598 aa15.31■□□□□ 0.04
DDX55-211ENST00000544429 TRAV18A0A075B6X5 111 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 TRBV6-7A0A0A0MS04 114 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 TXNL1O43396 289 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 SPCS2Q15005 226 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 ZNF833PQ6ZTB9 187 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 C16orf82Q7Z2V1 217 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 Q8N2B8 174 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 OR2AK2Q8NG84 335 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 OR56B4Q8NH76 319 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 MAFIPQ8WZ33 124 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 S100A16Q96FQ6 103 aaKnown RBP15.3■□□□□ 0.04
DDX55-211ENST00000544429 ZNF251Q9BRH9 671 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 AUNIPQ9H7T9 357 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 SCOCQ9UIL1 159 aa15.3■□□□□ 0.04
DDX55-211ENST00000544429 APOA1P02647 267 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 ZNF182P17025 639 aaPredicted RBP15.29■□□□□ 0.04
DDX55-211ENST00000544429 TALDO1P37837 337 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 CEACAM6P40199 344 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 REG1BP48304 166 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 IGSF11Q5DX21 431 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 C12orf54Q6X4T0 127 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 IZUMO1Q8IYV9 350 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 LYG1Q8N1E2 194 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 PHF21AQ96BD5 680 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 RBM14Q96PK6 669 aaKnown RBP15.29■□□□□ 0.04
DDX55-211ENST00000544429 C11orf54Q9H0W9 315 aaPredicted RBP15.29■□□□□ 0.04
DDX55-211ENST00000544429 BEX1Q9HBH7 125 aa15.29■□□□□ 0.04
DDX55-211ENST00000544429 SAA2-SAA4A0A096LPE2 208 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 CLPSL1A2RUU4 121 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 OR2F2O95006 317 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 AMY1AP04745 511 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 AMY2AP04746 511 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 EIF4EP06730 217 aaKnown RBP15.28■□□□□ 0.04
DDX55-211ENST00000544429 SNRNP70P08621 437 aaKnown RBP15.28■□□□□ 0.04
DDX55-211ENST00000544429 FAM106CPP0CH98 169 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 SAA2P0DJI9 122 aaPredicted RBP15.28■□□□□ 0.04
DDX55-211ENST00000544429 PROK1P58294 105 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 GNG2P59768 71 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 FAM71F2Q6NXP2 309 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 Q8N6K4 173 aa15.28■□□□□ 0.04
DDX55-211ENST00000544429 EDARADDQ8WWZ3 215 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms