RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 AKR1E2Q96JD6 320 aa25.08■■□□□ 1.61
CCM2-219ENST00000544363 FYTTD1Q96QD9 318 aaKnown RBP25.08■■□□□ 1.61
CCM2-219ENST00000544363 UTP20O75691 2785 aaKnown RBP25.08■■□□□ 1.61
CCM2-219ENST00000544363 A0A0B4J2A0 478 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 IGLV2-14P01704 120 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 CCL3L1P16619 93 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 C2orf68Q2NKX9 166 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 LIN54Q6MZP7 749 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 SHPKQ9UHJ6 478 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 KCNS2Q9ULS6 477 aa25.08■■□□□ 1.6
CCM2-219ENST00000544363 SLC22A5O76082 557 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 S100GP29377 79 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 PDLIM4P50479 330 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 ANKRD55Q3KP44 614 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 TBC1D26Q86UD7 250 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 COQ8AQ8NI60 647 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 FAM216AQ8WUB2 273 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 NARFLQ9H6Q4 476 aa25.07■■□□□ 1.6
CCM2-219ENST00000544363 BOLA2-SMG1P6H3BVE0 249 aa25.06■■□□□ 1.6
CCM2-219ENST00000544363 ANXA3P12429 323 aa25.06■■□□□ 1.6
CCM2-219ENST00000544363 PRAMEF5Q5TYX0 476 aa25.06■■□□□ 1.6
CCM2-219ENST00000544363 KCTD9Q7L273 389 aa25.06■■□□□ 1.6
CCM2-219ENST00000544363 ZNF645Q8N7E2 425 aa25.06■■□□□ 1.6
CCM2-219ENST00000544363 ZNF436Q9C0F3 470 aaPredicted RBP25.06■■□□□ 1.6
CCM2-219ENST00000544363 RNF150Q9ULK6 438 aa25.06■■□□□ 1.6
CCM2-219ENST00000544363 GOSR2O14653 212 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 PGLYRP1O75594 196 aaPredicted RBP25.05■■□□□ 1.6
CCM2-219ENST00000544363 MMP23AO75900 390 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 HEPN1Q6WQI6 88 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 TCTE3Q8IZS6 198 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 NRGNQ92686 78 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 OR2D2Q9H210 308 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 BARX1Q9HBU1 254 aaPredicted RBP25.05■■□□□ 1.6
CCM2-219ENST00000544363 PRR13Q9NZ81 148 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 RPUSD1Q9UJJ7 312 aaKnown RBP25.05■■□□□ 1.6
CCM2-219ENST00000544363 DOCK11Q5JSL3 2073 aa25.05■■□□□ 1.6
CCM2-219ENST00000544363 DBX1A6NMT0 343 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 ITGB1BP1O14713 200 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 OR5AC1P0C628 307 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 NFYBP25208 207 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 DLX6P56179 175 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 LY6G6FQ5SQ64 297 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 DRAM1Q8N682 238 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 PSMG3-AS1Q96PY0 264 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 AGMATQ9BSE5 352 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 SUCNR1Q9BXA5 334 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 PSG11Q9UQ72 335 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 TNFSF12O43508 249 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 ATP5J2P56134 94 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 GNB2P62879 340 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 MSMO1Q15800 293 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 ZNF787Q6DD87 383 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 ZBTB34Q8NCN2 500 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 C8orf46Q8TAG6 207 aa25.04■■□□□ 1.6
CCM2-219ENST00000544363 C3orf85A0A1B0GTC6 90 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 ST8SIA5O15466 376 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 HLA-GP17693 338 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 SSTR2P30874 369 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 TMEM187Q14656 261 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 SP6Q3SY56 376 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 GPHA2Q96T91 129 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 BPESC1Q9GZL8 116 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 YLPM1P49750 1951 aaKnown RBP25.03■■□□□ 1.6
CCM2-219ENST00000544363 MALRD1Q5VYJ5 2156 aa25.03■■□□□ 1.6
CCM2-219ENST00000544363 PAX1P15863 534 aa25.02■■□□□ 1.6
CCM2-219ENST00000544363 UTF1Q5T230 341 aa25.02■■□□□ 1.6
CCM2-219ENST00000544363 DMRTB1Q96MA1 342 aa25.02■■□□□ 1.6
CCM2-219ENST00000544363 TP53RKQ96S44 253 aa25.02■■□□□ 1.6
CCM2-219ENST00000544363 SSBP3Q9BWW4 388 aaPredicted RBP25.02■■□□□ 1.6
CCM2-219ENST00000544363 USP9YO00507 2555 aaPredicted RBP25.02■■□□□ 1.6
CCM2-219ENST00000544363 PHF1O43189 567 aaPredicted RBP25.01■■□□□ 1.59
CCM2-219ENST00000544363 SIX6O95475 246 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 IGHV3-7P01780 117 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 ZNF134P52741 427 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 GLYATL2Q8WU03 294 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 LEAP2Q969E1 77 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 OR2A4O95047 310 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 H2BFSP57053 126 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 ERVFRD-1P60508 538 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 ESCO2Q56NI9 601 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 OR5M8Q8NGP6 311 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 ABHD14BQ96IU4 210 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 OR2A7Q96R45 310 aa25.01■■□□□ 1.59
CCM2-219ENST00000544363 PPIAL4CA0A0B4J2A2 164 aa25■■□□□ 1.59
CCM2-219ENST00000544363 A0A1W2PPH5 198 aa25■■□□□ 1.59
CCM2-219ENST00000544363 IGHV2-5P01817 119 aa25■■□□□ 1.59
CCM2-219ENST00000544363 PPIAL4GP0DN37 164 aa25■■□□□ 1.59
CCM2-219ENST00000544363 F2RP25116 425 aa25■■□□□ 1.59
CCM2-219ENST00000544363 RAB7AP51149 207 aa25■■□□□ 1.59
CCM2-219ENST00000544363 ZNF439Q8NDP4 499 aa25■■□□□ 1.59
CCM2-219ENST00000544363 LY6G5BQ8NDX9 201 aa25■■□□□ 1.59
CCM2-219ENST00000544363 FAM168AQ92567 244 aa25■■□□□ 1.59
CCM2-219ENST00000544363 RAB39BQ96DA2 213 aa25■■□□□ 1.59
CCM2-219ENST00000544363 C5orf30Q96GV9 206 aa25■■□□□ 1.59
CCM2-219ENST00000544363 ABHD14AQ9BUJ0 271 aa25■■□□□ 1.59
CCM2-219ENST00000544363 CHIAQ9BZP6 476 aa25■■□□□ 1.59
CCM2-219ENST00000544363 PIPOXQ9P0Z9 390 aa25■■□□□ 1.59
CCM2-219ENST00000544363 C17orf98A8MV24 154 aa24.99■■□□□ 1.59
CCM2-219ENST00000544363 SLC31A2O15432 143 aa24.99■■□□□ 1.59
CCM2-219ENST00000544363 GIPP09681 153 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms