RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 UFSP2Q9NUQ7 469 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 PRR14LQ5THK1 2151 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 SYNGR2O43760 224 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 ZNF645Q8N7E2 425 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 RXFP4Q8TDU9 374 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 COQ2Q96H96 371 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 PRELID3BQ9Y3B1 194 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 DMXL1Q9Y485 3027 aa15.14■□□□□ 0.01
VIM-209ENST00000544301 KIAA2026Q5HYC2 2103 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 MEX3AA1L020 520 aaKnown RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 OOEPA6NGQ2 149 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 ZNF891A8MT65 544 aaPredicted RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 RNF212BA8MTL3 300 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 DFFBO76075 338 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 PTBP3O95758 552 aaKnown RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 IAPPP10997 89 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 GCH1P30793 250 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 MBNL2Q5VZF2 373 aaKnown RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 FAM53AQ6NSI3 398 aaPredicted RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 SEM1Q6ZVN7 128 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 BHLHA15Q7RTS1 189 aaPredicted RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 OR52L2PQ8NGH6 319 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 SNIP1Q8TAD8 396 aaKnown RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 RARRES2Q99969 163 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 RNF150Q9ULK6 438 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 PRELID1Q9Y255 219 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 PTPRBP23467 1997 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 COLCA2A8K830 154 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 HBZP02008 142 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 IL2RGP31785 369 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 AKR1C3P42330 323 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 TAS2R30P59541 319 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 P2RY6Q15077 328 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 AWAT1Q58HT5 328 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 SP5Q6BEB4 398 aaPredicted RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 ZADH2Q8N4Q0 377 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 KDF1Q8NAX2 398 aaPredicted RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 ESRP2Q9H6T0 727 aaKnown RBP15.13■□□□□ 0.01
VIM-209ENST00000544301 RPS10P5Q9NQ39 176 aa15.13■□□□□ 0.01
VIM-209ENST00000544301 OR5H1A6NKK0 313 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 AKR1C8PQ5T2L2 129 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 FGFRL1Q8N441 504 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 ZBTB34Q8NCN2 500 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 C5orf30Q96GV9 206 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 OR2D2Q9H210 308 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 KCNJ16Q9NPI9 418 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 PSENENQ9NZ42 101 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 METRNQ9UJH8 293 aa15.12■□□□□ 0.01
VIM-209ENST00000544301 A0A1B0GWJ7 208 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 BTBD17A6NE02 478 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 RBFOX3A6NFN3 312 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 CRYBA1P05813 215 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 GABRA2P47869 451 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 CLCC1Q96S66 551 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 TOLLIPQ9H0E2 274 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 SMDT1Q9H4I9 107 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 INTS1Q8N201 2190 aaKnown RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 ZNF318Q5VUA4 2279 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 MBD3L4A6NDZ8 208 aaPredicted RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 MBD3L3A6NE82 208 aaPredicted RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 MBD3L5A6NJ08 208 aaPredicted RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 IFNL4K9M1U5 179 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 IFNA5P01569 189 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 SNRNP70P08621 437 aaKnown RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 OR13C7P0DN81 318 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 COL10A1Q03692 680 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 EIF4EBP1Q13541 118 aaPredicted RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 AVPI1Q5T686 147 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 THNSL2Q86YJ6 484 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 MBD3L2Q8NHZ7 208 aaPredicted RBP15.11■□□□□ 0.01
VIM-209ENST00000544301 MRGPRDQ8TDS7 321 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 SLC25A15Q9Y619 301 aa15.11■□□□□ 0.01
VIM-209ENST00000544301 C7orf77A4D0Y5 90 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 METTL15P1P0C7V9 234 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 PAX6P26367 422 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 ARL16Q0P5N6 197 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 SMIM21Q3B7S5 101 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 KRBOX4Q5JUW0 171 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 FAM169BQ8N8A8 192 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 SAV1Q9H4B6 383 aaPredicted RBP15.1■□□□□ 0.01
VIM-209ENST00000544301 KIAA1456Q9P272 454 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 MMP24Q9Y5R2 645 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 M0R036 132 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 RAMP3O60896 148 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 GLIPR1P48060 266 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 RPL30P62888 115 aaKnown RBP15.1■□□□□ 0.01
VIM-209ENST00000544301 SLC25A24Q6NUK1 477 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 DPPA3Q6W0C5 159 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 BEND4Q6ZU67 534 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 C1orf174Q8IYL3 243 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 ZNF808Q8N4W9 903 aaPredicted RBP15.1■□□□□ 0.01
VIM-209ENST00000544301 C15orf54Q8N8G6 183 aa15.1■□□□□ 0.01
VIM-209ENST00000544301 CNOT1A5YKK6 2376 aaKnown RBP15.09■□□□□ 0.01
VIM-209ENST00000544301 NDUFA2O43678 99 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 HAPLN4Q86UW8 402 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 ZNF525Q8N782 197 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 TPRX1Q8N7U7 411 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 CD300LFQ8TDQ1 290 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 SFT2D1Q8WV19 159 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 NINJ1Q92982 152 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms