RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PARLQ9H300 379 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 BGLAPP02818 100 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 FCGR3AP08637 254 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 C10orf111Q8N326 155 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 PLAC1Q9HBJ0 212 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 CBLN4Q9NTU7 201 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 C9orf172C9J069 976 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 SGK494Q96LW2 274 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 SF3B5Q9BWJ5 86 aaKnown RBP13.43□□□□□ -0.26
CHD4-210ENST00000544040 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 TRIP6Q15654 476 aaKnown RBP13.43□□□□□ -0.26
CHD4-210ENST00000544040 TM4SF20Q53R12 229 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 SOX21Q9Y651 276 aaPredicted RBP13.43□□□□□ -0.26
CHD4-210ENST00000544040 CXCL10P02778 98 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 CCL4P13236 92 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 OR10J6PQ8NGY7 276 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 ST6GALNAC2Q9UJ37 374 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 LEPROTL1O95214 131 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 IL11P20809 199 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 PUSL1Q8N0Z8 303 aaKnown RBP13.43□□□□□ -0.26
CHD4-210ENST00000544040 OIT3Q8WWZ8 545 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 CDX2Q99626 313 aaPredicted RBP13.43□□□□□ -0.26
CHD4-210ENST00000544040 PRSS27Q9BQR3 290 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 CHST5Q9GZS9 411 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 ELF5Q9UKW6 265 aaPredicted RBP13.43□□□□□ -0.26
CHD4-210ENST00000544040 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 A8MWL6 223 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 OR10S1Q8NGN2 331 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 RNF133Q8WVZ7 376 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 GPHA2Q96T91 129 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 RBKSQ9H477 322 aa13.43□□□□□ -0.26
CHD4-210ENST00000544040 AMY1AP04745 511 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 RBM11P57052 281 aaKnown RBP13.42□□□□□ -0.26
CHD4-210ENST00000544040 NANOS3P60323 173 aaKnown RBP13.42□□□□□ -0.26
CHD4-210ENST00000544040 TMEM136Q6ZRR5 245 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 METTL26Q96S19 204 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 NPVFQ9HCQ7 196 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 TBX21Q9UL17 535 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 EVPLQ92817 2033 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 H0YL77 283 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 H3BTX0 84 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 ZIC3O60481 467 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 FOXL2P58012 376 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 EBLN2Q6P2I7 272 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 CDC42EP3Q9UKI2 254 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 SIRT4Q9Y6E7 314 aaPredicted RBP13.42□□□□□ -0.26
CHD4-210ENST00000544040 A0A1W2PQD3 144 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 PGPA6NDG6 321 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 TSPAN2O60636 221 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 NAT2P11245 290 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 CCL13Q99616 98 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 PRDX2P32119 198 aa13.42□□□□□ -0.26
CHD4-210ENST00000544040 ZNF107Q9UII5 783 aaPredicted RBP13.42□□□□□ -0.26
CHD4-210ENST00000544040 A0A1B0GV90 55 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 LINC00869P0C866 280 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 EPHA8P29322 1005 aaPredicted RBP13.41□□□□□ -0.26
CHD4-210ENST00000544040 ZNF506Q5JVG8 444 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 WIPI2Q9Y4P8 454 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 SS18L1O75177 396 aaPredicted RBP13.41□□□□□ -0.26
CHD4-210ENST00000544040 RPL31P62899 125 aaKnown RBP13.41□□□□□ -0.26
CHD4-210ENST00000544040 MIC13Q5XKP0 118 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 RHBDD2Q6NTF9 364 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 HPRT1P00492 218 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 OR4B1Q8NGF8 309 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 DPH3Q96FX2 82 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 ZNF385AQ96PM9 386 aaKnown RBP13.41□□□□□ -0.26
CHD4-210ENST00000544040 KCNK7Q9Y2U2 307 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 MOB4Q9Y3A3 225 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 GRIFINA4D1Z8 144 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 DDTP30046 118 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 NXPH1P58417 271 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 ZBTB34Q8NCN2 500 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 ST6GALNAC3Q8NDV1 305 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 UQCR10Q9UDW1 63 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 RBFOX2O43251 390 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■■□ 21
CHD4-210ENST00000544040 PPP1R17O96001 155 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 SCTP09683 121 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 DRD3P35462 400 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 DLX6P56179 175 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 C12orf54Q6X4T0 127 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 LRRC3BQ96PB8 259 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 DMRTA2Q96SC8 542 aa13.41□□□□□ -0.26
CHD4-210ENST00000544040 IGHV4-34P06331 123 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 PCP4P48539 62 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 IRF3Q14653 427 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 LINC00596Q86U02 117 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
CHD4-210ENST00000544040 DDA1Q9BW61 102 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 WNT5BQ9H1J7 359 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 DTX4Q9Y2E6 619 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 TMEM210A6NLX4 147 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 CCL8P80075 99 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 SH3BGRL3Q9H299 93 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms