RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 Q3ZCU0 254 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 RUSC1-AS1Q66K80 236 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 ZNF596Q8TC21 504 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 S100ZQ8WXG8 99 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 THAP7Q9BT49 309 aaPredicted RBP9.44□□□□□ -0.9
YBX3-213ENST00000542641 SRRQ9GZT4 340 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 MS4A7Q9GZW8 240 aaPredicted RBP9.44□□□□□ -0.9
YBX3-213ENST00000542641 AKIP1Q9NQ31 210 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 NECAP2Q9NVZ3 263 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 ZNF69Q9UC07 566 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 F8P00451 2351 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 ANK3Q12955 4377 aaKnown RBP9.43□□□□□ -0.9
YBX3-213ENST00000542641 ODF3BA8MYP8 253 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 ZNF736B4DX44 427 aaPredicted RBP9.43□□□□□ -0.9
YBX3-213ENST00000542641 LANCL1O43813 399 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 HRH1P35367 487 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 SAA4P35542 130 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 RFX2P48378 723 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 ZNF134P52741 427 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 TAS2R19P59542 299 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 CDK10Q15131 360 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 MIDNQ504T8 468 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 CT45A1Q5HYN5 189 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 LY6G6FQ5SQ64 297 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 ZNF626Q68DY1 528 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 MFSD4AQ8N468 514 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 GDPD1Q8N9F7 314 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 BEND2Q8NDZ0 799 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 OR2AK2Q8NG84 335 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 OR10X1Q8NGY0 326 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 CT45A3Q8NHU0 189 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 MMP28Q9H239 520 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 RDH8Q9NYR8 311 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 TAS2R8Q9NYW2 309 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 EHFQ9NZC4 300 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 ZNRD1Q9P1U0 126 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 RBMX2Q9Y388 322 aaKnown RBP9.43□□□□□ -0.9
YBX3-213ENST00000542641 TLN2Q9Y4G6 2542 aa9.43□□□□□ -0.9
YBX3-213ENST00000542641 BUB1B-PAK6H3BSN5 160 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 SLC31A2O15432 143 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 CD3DP04234 171 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 CSF1P09603 554 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 OR5H8P0DN80 308 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 SRD5A1P18405 259 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 EPHA1P21709 976 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 NFYAP23511 347 aaPredicted RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 HTR1DP28221 377 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 HLA-DRB5Q30154 266 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 ACTBL2Q562R1 376 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 OVCH2Q7RTZ1 564 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 LINC00311Q8N616 119 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 TMEM229BQ8NBD8 167 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 ZNF439Q8NDP4 499 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 OR4P4Q8NGL7 312 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 EDARADDQ8WWZ3 215 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 C22orf15Q8WYQ4 148 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 CREB3L1Q96BA8 519 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 ABHD14AQ9BUJ0 271 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 PARP12Q9H0J9 701 aaKnown RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 C11orf54Q9H0W9 315 aaPredicted RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 ZNF107Q9UII5 783 aaPredicted RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 FAM96BQ9Y3D0 163 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 TBL2Q9Y4P3 447 aaKnown RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 AMMECR1Q9Y4X0 333 aaPredicted RBP9.42□□□□□ -0.9
YBX3-213ENST00000542641 HIVEP2P31629 2446 aa9.42□□□□□ -0.9
YBX3-213ENST00000542641 A0A0U1RQK1 487 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 LEUTXA8MZ59 168 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 M0QYG6 137 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 ITGB1BP1O14713 200 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 IFNA6P05013 189 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 OR8U9P0C7N5 309 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 TBPP20226 339 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 FCGR2CP31995 323 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 INPP1P49441 399 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 RAB7AP51149 207 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 TSPAN5P62079 268 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 SCGB2A2Q13296 93 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 DYRK1AQ13627 763 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 ZNF846Q147U1 533 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 BAK1Q16611 211 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 RNASE10Q5GAN6 216 aaKnown RBP9.41□□□□□ -0.9
YBX3-213ENST00000542641 MINOS1Q5TGZ0 78 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 TRIQKQ629K1 86 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 STEAP1BQ6NZ63 245 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 LHFPL4Q7Z7J7 247 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 BCL6BQ8N143 479 aaPredicted RBP9.41□□□□□ -0.9
YBX3-213ENST00000542641 LYG1Q8N1E2 194 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 OR8U1Q8NH10 309 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 WDR12Q9GZL7 423 aaKnown RBP9.41□□□□□ -0.9
YBX3-213ENST00000542641 TOLLIPQ9H0E2 274 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 DPM3Q9P2X0 92 aa9.41□□□□□ -0.9
YBX3-213ENST00000542641 RBM7Q9Y580 266 aaKnown RBP9.41□□□□□ -0.9
YBX3-213ENST00000542641 SOX21Q9Y651 276 aaPredicted RBP9.41□□□□□ -0.9
YBX3-213ENST00000542641 MINOS1-NBL1R4GNA1 71 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms