RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 CEACAM19Q7Z692 300 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ZNF429Q86V71 674 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 PELI1Q96FA3 418 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ABRACLQ9P1F3 81 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ETV7Q9Y603 341 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 A0A1B0GTH9 108 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 A0A1W2PR80 420 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 FRG2CA6NGY1 282 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 CTXN1P60606 82 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 TMPRSS12Q86WS5 348 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 C20orf196Q8IYI0 205 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 NAT6Q93015 286 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 C8orf44Q96CB5 159 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 SMIM3Q9BZL3 60 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 NPVFQ9HCQ7 196 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 KLHDC2Q9Y2U9 406 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 AK6Q9Y3D8 172 aaKnown RBP9.54□□□□□ -0.88
CDH3-203ENST00000542274 IGHV2-26A0A0B4J1V2 119 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 SRD5A2P31213 254 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 PAX9P55771 341 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 RPS4XP62701 263 aaKnown RBP9.54□□□□□ -0.88
CDH3-203ENST00000542274 RPL18Q07020 188 aaKnown RBP9.54□□□□□ -0.88
CDH3-203ENST00000542274 UBE2NLQ5JXB2 153 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 LGALS14Q8TCE9 139 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 DCBLD2Q96PD2 775 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 RARRES2Q99969 163 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 GCM1Q9NP62 436 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 ST6GALNAC2Q9UJ37 374 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 GPR132Q9UNW8 380 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 A0A0G2JMM0 328 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 A0A1W2PPB8 328 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 GAGE10A6NGK3 116 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 KIR3DP1A8MWS1 328 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 EEF1E1-BLOC1S5C9J1V9 151 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 SCRG1O75711 98 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 PRDX4Q13162 271 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 ALG10Q5BKT4 473 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 HLA-DQA1Q5Y7H0 255 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 SLC35F2Q8IXU6 374 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 OR5A2Q8NGI9 324 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 TSPAN32Q96QS1 320 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 NIPSNAP3BQ9BS92 247 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 NDFIP1Q9BT67 221 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 FBLN5Q9UBX5 448 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 SELENOKQ9Y6D0 94 aa9.54□□□□□ -0.88
CDH3-203ENST00000542274 CNTRLQ7Z7A1 2325 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 KNTC1P50748 2209 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 A0A1B0GV50 99 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 NUPR1O60356 82 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 HIST3H3Q16695 136 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 LINC01590Q5TEZ4 76 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 LRRC75AQ8NAA5 344 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 NHLRC2Q8NBF2 726 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 RTBDNQ9BSG5 229 aaPredicted RBP9.53□□□□□ -0.88
CDH3-203ENST00000542274 NXT1Q9UKK6 140 aaKnown RBP9.53□□□□□ -0.88
CDH3-203ENST00000542274 RARRES3Q9UL19 164 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 C13orf42A0A1B0GVH6 325 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 CCL4P13236 92 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 FBXW4P57775 412 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 NANOS3P60323 173 aaKnown RBP9.53□□□□□ -0.88
CDH3-203ENST00000542274 ARG2P78540 354 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 DMKNQ6E0U4 476 aaPredicted RBP9.53□□□□□ -0.88
CDH3-203ENST00000542274 LGI3Q8N145 548 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 OR5AK2Q8NH90 309 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 STARD4Q96DR4 205 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 GPR82Q96P67 336 aa9.53□□□□□ -0.88
CDH3-203ENST00000542274 TRBV6-7A0A0A0MS04 114 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 FAM230AA0A1W2PPH8 454 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 ASAH2BP0C7U1 165 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 ZNF28P17035 718 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 CNN1P51911 297 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 ZNF684Q5T5D7 378 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 C1orf174Q8IYL3 243 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 ADAD2Q8NCV1 583 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 OR4A5Q8NH83 315 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 SNIP1Q8TAD8 396 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 BTF3L4Q96K17 158 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 IMMP2LQ96T52 175 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 RNF126Q9BV68 326 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 WDR76Q9H967 626 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 BOKQ9UMX3 212 aaPredicted RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 IFITM5A6NNB3 132 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 FAM166BA8MTA8 275 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 SLC17A3O00476 420 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 ZNF207O43670 478 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 CD99P14209 185 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 UBE2NP61088 152 aaKnown RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH3-203ENST00000542274 TNXAQ16473 311 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.89
CDH3-203ENST00000542274 RHBDD2Q6NTF9 364 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 PNKDQ8N490 385 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 APCDD1LQ8NCL9 501 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 OR51A2Q8NGJ7 313 aa9.52□□□□□ -0.89
CDH3-203ENST00000542274 PSMF1Q92530 271 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms