RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RAB7AP51149 207 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 ZNF137PP52743 207 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 EBI3Q14213 229 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 HERPUD1Q15011 391 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 Q3ZCU0 254 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 STEAP3Q658P3 488 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 CCDC144NLQ6NUI1 221 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 MOB3BQ86TA1 216 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 LGALS14Q8TCE9 139 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 WIPF2Q8TF74 440 aaPredicted RBP7.75□□□□□ -1.17
YBX3-212ENST00000542002 IL1F10Q8WWZ1 152 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 MAFIPQ8WZ33 124 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 RITA1Q96K30 269 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 YPEL2Q96QA6 119 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 CMSS1Q9BQ75 279 aaKnown RBP7.75□□□□□ -1.17
YBX3-212ENST00000542002 AGMATQ9BSE5 352 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 ATG5Q9H1Y0 275 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 RIMS4Q9H426 269 aaPredicted RBP7.75□□□□□ -1.17
YBX3-212ENST00000542002 PLSCR3Q9NRY6 295 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 JPT1Q9UK76 154 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 FBN3Q75N90 2809 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 LINC01548A6NM66 108 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 TRDCB7Z8K6 153 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 AIREO43918 545 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 PROP1O75360 226 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 IGKV1D-33P01593 117 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 IGKV1-33P01594 117 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 GSTT2P0CG29 244 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 GSTT2BP0CG30 244 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 VSIG10L2P0DP72 767 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 HIST1H1DP16402 221 aaKnown RBP7.74□□□□□ -1.17
YBX3-212ENST00000542002 TMEM30BQ3MIR4 351 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 CDNFQ49AH0 187 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 ABCA11PQ4W5N1 156 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 IGSF11Q5DX21 431 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 PRR31Q5SQ13 230 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 LY6G6FQ5SQ64 297 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 IDNKQ5T6J7 187 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 OR8H3Q8N146 312 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 LYG1Q8N1E2 194 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 Q8N6K4 173 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 KLHDC1Q8N7A1 406 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 C11orf44Q8N8P7 122 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 OR13F1Q8NGS4 319 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 OR2T6Q8NHC8 308 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 SGMS2Q8NHU3 365 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 SLC25A38Q96DW6 304 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 EAF1Q96JC9 268 aaPredicted RBP7.74□□□□□ -1.17
YBX3-212ENST00000542002 ZNF251Q9BRH9 671 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 ABHD14AQ9BUJ0 271 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 FUNDC2Q9BWH2 189 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 IFI27L2Q9H2X8 130 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 C12orf4Q9NQ89 552 aa7.74□□□□□ -1.17
YBX3-212ENST00000542002 METTL21EPA6NDL7 271 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 LANCL1O43813 399 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 LPLP06858 475 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 FCGR3AP08637 254 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 CD28P10747 220 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 CEACAM6P40199 344 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 F2RL1P55085 397 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 LINC00205P59089 165 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 NCS1P62166 190 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 HLA-DRB3P79483 266 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 HES1Q14469 280 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 ZNF260Q3ZCT1 412 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 C11orf88Q6PI97 169 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 C10orf99Q6UWK7 81 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 ZNF833PQ6ZTB9 187 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 NAA50Q9GZZ1 169 aaKnown RBP7.73□□□□□ -1.17
YBX3-212ENST00000542002 C11orf54Q9H0W9 315 aaPredicted RBP7.73□□□□□ -1.17
YBX3-212ENST00000542002 RAB9BQ9NP90 201 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 ABRACLQ9P1F3 81 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 SLC23A1Q9UHI7 598 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 PKD1L1Q8TDX9 2849 aa7.73□□□□□ -1.17
YBX3-212ENST00000542002 SAA2-SAA4A0A096LPE2 208 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 SSX5O60225 188 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 TFAP2AP05549 437 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 SAA2P0DJI9 122 aaPredicted RBP7.72□□□□□ -1.17
YBX3-212ENST00000542002 CT45A6P0DMU7 189 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 CT45A5P0DMU8 189 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 CT45A7P0DMV0 189 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 TMEM11P17152 192 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 CD1BP29016 333 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 RANBP1P43487 201 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 ARHGDIBP52566 201 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 VBP1P61758 197 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 RPL39P5Q59GN2 51 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 TCTEX1D4Q5JR98 221 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 MOB1BQ7L9L4 216 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 C16orf82Q7Z2V1 217 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 TGIF2LXQ8IUE1 241 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 IZUMO1Q8IYV9 350 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 C5orf56Q8N8D9 126 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 DTX3Q8N9I9 347 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 OR2AK2Q8NG84 335 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms