RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SIGLEC5O15389 551 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 AIREO43918 545 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF780AO75290 641 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 RHBDL1O75783 438 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 NXPH2O95156 264 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 PSG2P11465 335 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ATF1P18846 271 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 MYL12AP19105 171 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 RBMXP38159 391 aaKnown RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 HTR2BP41595 481 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 RBP2P50120 134 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 CAV3P56539 151 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 OR12D2P58182 307 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 HILS1P60008 231 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 FGF12P61328 243 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ARF6P62330 175 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 PAX2Q02962 417 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 IL24Q13007 206 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 HNRNPA0Q13151 305 aaKnown RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 STUMQ69YW2 141 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 TRAT1Q6PIZ9 186 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 C12orf54Q6X4T0 127 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ACP7Q6ZNF0 438 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 C9orf139Q6ZV77 190 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 Q8IYB0 196 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 PRSS35Q8N3Z0 413 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF561Q8N587 486 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ZSCAN4Q8NAM6 433 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 OR52I1Q8NGK6 324 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 OR5D14Q8NGL3 314 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 OR13C3Q8NGS6 347 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 OR5H6Q8NGV6 325 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 NPRL2Q8WTW4 380 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 H1FXQ92522 213 aaKnown RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 CPNE2Q96FN4 548 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 C4orf36Q96KX1 117 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 C17orf77Q96MU5 243 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 SLC6A7Q99884 636 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 C19orf24Q9BVV8 132 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 CHST5Q9GZS9 411 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 NAA50Q9GZZ1 169 aaKnown RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 RANBP3Q9H6Z4 567 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 AMBNQ9NP70 447 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 FGF20Q9NP95 211 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 MED9Q9NWA0 146 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 CTSZQ9UBR2 303 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 RPUSD1Q9UJJ7 312 aaKnown RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 ING4Q9UNL4 249 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 EXOSC1Q9Y3B2 195 aaKnown RBP4.38□□□□□ -1.71
CPSF7-220ENST00000541963 KPTNQ9Y664 436 aa4.38□□□□□ -1.71
CPSF7-220ENST00000541963 TRAV40A0A0B4J280 105 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 TRBV2A0A0J9YWF9 115 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 LOC107986453A0A1B0GWG9 222 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 MEIOCA2RUB1 952 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 RFPL4AA6NLU0 287 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 TMEM212A6NML5 194 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 E9PI62 339 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 RFPL4AL1F8VTS6 287 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 H3BSH0 61 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 BUB3O43684 328 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ORC5O43913 435 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 VENTXO95231 258 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 CD2P06729 351 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PGA5P0DJD9 388 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 CD36P16671 472 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PRKACAP17612 351 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 RAB3AP20336 220 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 MPZP25189 248 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 AZGP1P25311 298 aaKnown RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PSMB9P28065 219 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PRDX2P32119 198 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 MNDAP41218 407 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 MTCP1P56278 107 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ACTG1P63261 375 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 FLI1Q01543 452 aaPredicted RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 IFITM3Q01628 133 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 EMX1Q04741 257 aaPredicted RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 UBE2V2Q15819 145 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 KLF17Q5JT82 389 aaPredicted RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 NCR3LG1Q68D85 454 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 RPL22L1Q6P5R6 122 aaKnown RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PLET1Q6UQ28 207 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 UTS2BQ765I0 119 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 NFE4Q86UQ8 179 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ANGPTL5Q86XS5 388 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 SERPINA12Q8IW75 414 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PHC2Q8IXK0 858 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 RDH10Q8IZV5 341 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 KIR3DL3Q8N743 410 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 FAM216BQ8N7L0 139 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 SIGLECL1Q8N7X8 197 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 LY6G5BQ8NDX9 201 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 TMEM185AQ8NFB2 350 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 OR5D13Q8NGL4 314 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 OR5AK2Q8NH90 309 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 C8orf46Q8TAG6 207 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 TRMT10AQ8TBZ6 339 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms