RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 MS4A5Q9H3V2 200 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 DECR2Q9NUI1 292 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 EHFQ9NZC4 300 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 DNAJB11Q9UBS4 358 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 PPP1R3CQ9UQK1 317 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 CHD6Q8TD26 2715 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 MSGN1A6NI15 193 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 C9JQL5 133 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.29□□□□□ -1.24
THBS3-210ENST00000541576 SCGB1D2O95969 90 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 TFF1P04155 84 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 MDH2P40926 338 aaKnown RBP7.29□□□□□ -1.24
THBS3-210ENST00000541576 RAB2AP61019 212 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 MST1LQ2TV78 715 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 FAM90A1Q86YD7 464 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 MUC15Q8N387 334 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
THBS3-210ENST00000541576 ADAD2Q8NCV1 583 aaKnown RBP7.29□□□□□ -1.24
THBS3-210ENST00000541576 OR11L1Q8NGX0 322 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 Q8TCH9 128 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 SAP30LQ9HAJ7 183 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 RNF7Q9UBF6 113 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 TNFSF18Q9UNG2 199 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 VSIG4Q9Y279 399 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 FAM208BQ5VWN6 2430 aa7.29□□□□□ -1.24
THBS3-210ENST00000541576 LRRK2Q5S007 2527 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 IFNL4K9M1U5 179 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 ZNF205O95201 554 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 LHBP01229 141 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 TPT1P13693 172 aaKnown RBP7.28□□□□□ -1.24
THBS3-210ENST00000541576 IRF2P14316 349 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 LMO1P25800 156 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 ZNF383Q8NA42 475 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 TERB2Q8NHR7 220 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 WIPI2Q9Y4P8 454 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 DYSFO75923 2080 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 C19orf84I3L1E1 186 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 C1QL1O75973 258 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 HOXB5P09067 269 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 SMIM6P0DI80 62 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 OR13C7P0DN81 318 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 SELLP14151 372 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 DHRS7BQ6IAN0 325 aaPredicted RBP7.28□□□□□ -1.24
THBS3-210ENST00000541576 C20orf204Q6ZNR8 217 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 BAP18Q8IXM2 172 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 MRPL30Q8TCC3 161 aaKnown RBP7.28□□□□□ -1.24
THBS3-210ENST00000541576 FAM222BQ8WU58 562 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 TCTEX1D2Q8WW35 142 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 OR51M1Q9H341 326 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 LIME1Q9H400 295 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 METTL8Q9H825 291 aaKnown RBP7.28□□□□□ -1.24
THBS3-210ENST00000541576 Q9N2K0 584 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 NECAP2Q9NVZ3 263 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 TREM2Q9NZC2 230 aa7.28□□□□□ -1.24
THBS3-210ENST00000541576 PUS1Q9Y606 427 aaKnown RBP eCLIP7.28□□□□□ -1.24
THBS3-210ENST00000541576 TRBV6-6A0A0A6YYG2 114 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 LRRC30A6NM36 301 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 RNASEK-C17orf49H0YIS7 233 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 PSPNO60542 156 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 CYB5R3P00387 301 aaPredicted RBP7.27□□□□□ -1.24
THBS3-210ENST00000541576 PSG2P11465 335 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 G0S2P27469 103 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 SRSF7Q16629 238 aaKnown RBP eCLIP7.27□□□□□ -1.24
THBS3-210ENST00000541576 Q6ZS49 121 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 OR5M8Q8NGP6 311 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 RNF141Q8WVD5 230 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 HIST1H2BAQ96A08 127 aa7.27□□□□□ -1.24
THBS3-210ENST00000541576 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
THBS3-210ENST00000541576 IGHV3OR15-7A0A075B7D8 119 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 COLCA2A8K830 154 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 OR2F2O95006 317 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 OR5H8P0DN80 308 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 PRDX2P32119 198 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 NPY4RP50391 375 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 COL10A1Q03692 680 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 OR2F1Q13607 317 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 FAM201AQ5SY85 155 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 AADACL3Q5VUY0 350 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 LHFPL1Q86WI0 220 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 CD177Q8N6Q3 437 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 PLPPR1Q8TBJ4 325 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 MARCH1Q8TCQ1 289 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 RRNAD1Q96FB5 475 aaKnown RBP7.27□□□□□ -1.25
THBS3-210ENST00000541576 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 FBXO7Q9Y3I1 522 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 COL12A1Q99715 3063 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 IGKV1D-17A0A075B6S4 117 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 KIR2DS1A0A191URI9 304 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 GPR37O15354 613 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 NDUFB7P17568 137 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 GPX4P36969 197 aaPredicted RBP7.27□□□□□ -1.25
THBS3-210ENST00000541576 KIR2DS4P43632 304 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 KIR2DS1Q14954 304 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 AWAT1Q58HT5 328 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 ZNF497Q6ZNH5 498 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 TGIF2LYQ8IUE0 185 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 ZNF565Q8N9K5 539 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 ALX4Q9H161 411 aaPredicted RBP7.27□□□□□ -1.25
THBS3-210ENST00000541576 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
THBS3-210ENST00000541576 KIAA2026Q5HYC2 2103 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms