RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ETHE1O95571 254 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 CDS2O95674 445 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 BCL2P10415 239 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 MYOGP15173 224 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 GALNSP34059 522 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 TMEM170BQ5T4T1 132 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 FAM74A4Q5TZK3 123 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 GMPPAQ96IJ6 420 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-210ENST00000541363 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 NALCNQ8IZF0 1738 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 FGF5P12034 268 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 CNTFRP26992 372 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 LHFPL5Q8TAF8 219 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 CNRIP1Q96F85 164 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-210ENST00000541363 LRRC61Q9BV99 259 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 FSCN3Q9NQT6 498 aa13.45□□□□□ -0.26
HMGA2-210ENST00000541363 TMEM250H0YL14 139 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 CDIPTO14735 213 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 SNRPD3P62318 126 aaKnown RBP13.44□□□□□ -0.26
HMGA2-210ENST00000541363 FAM106AQ4KMX7 169 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 TMEM177Q53S58 311 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 LDLRAD1Q5T700 205 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 MBNL2Q5VZF2 373 aaKnown RBP13.44□□□□□ -0.26
HMGA2-210ENST00000541363 TCF23Q7RTU1 214 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 OR2K2Q8NGT1 345 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 TYMSP04818 313 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 EPHA8P29322 1005 aaPredicted RBP13.44□□□□□ -0.26
HMGA2-210ENST00000541363 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 PRRT4C9JH25 899 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 EML2O95834 649 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 SEC11BP0C7V7 166 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 PRSS12P56730 875 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 SOX8P57073 446 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 INSL4Q14641 139 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 ADAD2Q8NCV1 583 aaKnown RBP13.44□□□□□ -0.26
HMGA2-210ENST00000541363 OR5AC2Q9NZP5 309 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 A0A1B0GV90 55 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 IGF2P01344 180 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 TBL2Q9Y4P3 447 aaKnown RBP13.44□□□□□ -0.26
HMGA2-210ENST00000541363 LRRC37A3O60309 1634 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 TGIF2-C20orf24A0A0A6YYL0 155 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 TDHQ8IZJ6 230 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 KLK8O60259 260 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 NDUFB4O95168 129 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 HPRT1P00492 218 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
HMGA2-210ENST00000541363 C4AP0C0L4 1744 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 FTH1P19P0C7X4 201 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
HMGA2-210ENST00000541363 A0A1B0GWB2 263 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 SOCS1O15524 211 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 REG1BP48304 166 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 WDR34Q96EX3 536 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 DDA1Q9BW61 102 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 TRBV9A0A0B4J1U6 114 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 LSM6P62312 80 aaKnown RBP13.43□□□□□ -0.26
HMGA2-210ENST00000541363 MZB1Q8WU39 189 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 SF3B6Q9Y3B4 125 aaKnown RBP13.43□□□□□ -0.26
HMGA2-210ENST00000541363 ERGP11308 486 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 SELENOTP62341 195 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 PGLYRP3Q96LB9 341 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 OR2A4O95047 310 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 GAPDHP04406 335 aaKnown RBP13.43□□□□□ -0.26
HMGA2-210ENST00000541363 TM4SF4P48230 202 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 COL10A1Q03692 680 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 KIR3DL3Q8N743 410 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 ST6GAL2Q96JF0 529 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 RHOVQ96L33 236 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 OR2A7Q96R45 310 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 PRR35P0CG20 571 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 LYZL2Q7Z4W2 148 aa13.43□□□□□ -0.26
HMGA2-210ENST00000541363 ARHGEF17Q96PE2 2063 aaPredicted RBP13.43□□□□□ -0.26
HMGA2-210ENST00000541363 ARID1AO14497 2285 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 MYF5P13349 255 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 RHNO1Q9BSD3 238 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 AGFG2O95081 481 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 RPL31P62899 125 aaKnown RBP13.42□□□□□ -0.26
HMGA2-210ENST00000541363 SAPCD1Q5SSQ6 148 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 SPINK14Q6IE38 97 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 SPEM1Q8N4L4 309 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 CADM4Q8NFZ8 388 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 TUBA4BQ9H853 241 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 H7C1H1 209 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 CA1P00915 261 aaPredicted RBP13.42□□□□□ -0.26
HMGA2-210ENST00000541363 LIPFP07098 398 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 CFAP161Q6P656 301 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 RGPD5Q99666 1765 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 MALP21145 153 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 FAM159AQ6UWV7 190 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 KCNK7Q9Y2U2 307 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 ZNF688P0C7X2 276 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 SSTR5P35346 364 aa13.42□□□□□ -0.26
HMGA2-210ENST00000541363 MRPL24Q96A35 216 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms