RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 GNMTQ14749 295 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 AGMATQ9BSE5 352 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 SHPKQ9UHJ6 478 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 IGHV3-43A0A0B4J1X8 118 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 MPPED1O15442 326 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 IFNA2P01563 188 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 IGHV3-43DP0DP04 118 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 ANXA3P12429 323 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 GNB2P62879 340 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 Q3ZCU0 254 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 PHLDA2Q53GA4 152 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 KCTD9Q7L273 389 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 OR2AK2Q8NG84 335 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 OR11H7Q8NGC8 314 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 RAB39BQ96DA2 213 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 DMRTB1Q96MA1 342 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 GSX2Q9BZM3 304 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 PARP12Q9H0J9 701 aaKnown RBP14.61□□□□□ -0.07
CLIP1-215ENST00000541108 NAA60Q9H7X0 242 aa14.61□□□□□ -0.07
CLIP1-215ENST00000541108 RPUSD1Q9UJJ7 312 aaKnown RBP14.61□□□□□ -0.07
CLIP1-215ENST00000541108 MALRD1Q5VYJ5 2156 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 HSD17B6O14756 317 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 IGLV2-14P01704 120 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 CD34P28906 385 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 ZNF645Q8N7E2 425 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 COQ8AQ8NI60 647 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 ST6GAL2Q96JF0 529 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 SSBP3Q9BWW4 388 aaPredicted RBP14.6□□□□□ -0.07
CLIP1-215ENST00000541108 BPESC1Q9GZL8 116 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 CRYBG3Q68DQ2 2970 aa14.6□□□□□ -0.07
CLIP1-215ENST00000541108 TENM4Q6N022 2769 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 B3GALNT1O75752 331 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 CCL3L1P16619 93 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 HLA-GP17693 338 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 CXCL3P19876 107 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 RAB7AP51149 207 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 DLX6P56179 175 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 LTC4SQ16873 150 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 ESCO2Q56NI9 601 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 LY6G5BQ8NDX9 201 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 CASTOR1Q8WTX7 329 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 FAM168AQ92567 244 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 SUCNR1Q9BXA5 334 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 GAB2Q9UQC2 676 aa14.59□□□□□ -0.07
CLIP1-215ENST00000541108 DBX1A6NMT0 343 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 PGLYRP1O75594 196 aaPredicted RBP14.58□□□□□ -0.07
CLIP1-215ENST00000541108 RBP4P02753 201 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 DSCR9P59020 149 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 FAM53AQ6NSI3 398 aaPredicted RBP14.58□□□□□ -0.07
CLIP1-215ENST00000541108 TBC1D26Q86UD7 250 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 UXS1Q8NBZ7 420 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 MARVELD3Q96A59 401 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 OR2D2Q9H210 308 aa14.58□□□□□ -0.07
CLIP1-215ENST00000541108 HELZ2Q9BYK8 2649 aaKnown RBP14.58□□□□□ -0.08
CLIP1-215ENST00000541108 YLPM1P49750 1951 aaKnown RBP14.58□□□□□ -0.08
CLIP1-215ENST00000541108 PPIAL4CA0A0B4J2A2 164 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 C3orf85A0A1B0GTC6 90 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 C17orf98A8MV24 154 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 IGHV2-5P01817 119 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 PPIAL4GP0DN37 164 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 CD83Q01151 205 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 SLC9A3R2Q15599 337 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 CLEC2AQ6UVW9 174 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 DRAM1Q8N682 238 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 ASB13Q8WXK3 278 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 PIMREGQ9BSJ6 248 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 MGAT4CQ9UBM8 478 aa14.58□□□□□ -0.08
CLIP1-215ENST00000541108 ARID1AO14497 2285 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 SPG11Q96JI7 2443 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 A0A087X0M5 115 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 A0A1B0GX30 115 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 MMP23AO75900 390 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 LIPFP07098 398 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 F2RP25116 425 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 NFYBP25208 207 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 ZNF134P52741 427 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 PRAMEF5Q5TYX0 476 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 TCTE3Q8IZS6 198 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 C11orf42Q8N5U0 333 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 LRTM2Q8N967 370 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 ZNF439Q8NDP4 499 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 C10orf105Q8TEF2 133 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 GLYATL2Q8WU03 294 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 NRGNQ92686 78 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 ZNF436Q9C0F3 470 aaPredicted RBP14.57□□□□□ -0.08
CLIP1-215ENST00000541108 NARFLQ9H6Q4 476 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 RANGRFQ9HD47 186 aaPredicted RBP14.57□□□□□ -0.08
CLIP1-215ENST00000541108 KCNS2Q9ULS6 477 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 PSG11Q9UQ72 335 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 DOPEY2Q9Y3R5 2298 aa14.57□□□□□ -0.08
CLIP1-215ENST00000541108 PIGBOS1A0A0B4J2F0 54 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 hCG_1809904A0A1W2PP81 198 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 A0A1W2PPE2 198 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 A0A1W2PR64 198 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 A0A1W2PRV1 198 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 VWC2LB2RUY7 222 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 OR2A4O95047 310 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 OR5AC1P0C628 307 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 SRPXP78539 464 aa14.56□□□□□ -0.08
CLIP1-215ENST00000541108 CD300CQ08708 224 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms