RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SMCO3A2RU48 225 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 CD300LBA8K4G0 201 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 MRPL33O75394 65 aaKnown RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 CYB5R3P00387 301 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 CRYAAP02489 173 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 MDH2P40926 338 aaKnown RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 GNB2P62879 340 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 BAXQ07812 192 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF585BQ52M93 769 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 CYB5R2Q6BCY4 276 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 LHX4Q969G2 390 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ZDHHC16Q969W1 377 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ADGRG7Q96K78 797 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 OR2W1Q9Y3N9 320 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 C1QTNF9BB2RNN3 333 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 K7ESF4 209 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF737O75373 536 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 CLDN1O95832 211 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 KRASP01116 189 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 HNF1AP20823 631 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF816Q0VGE8 651 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 USF2Q15853 346 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 GCSAMLQ5JQS6 135 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 CXorf67Q86X51 503 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-207ENST00000540998 MKXQ8IYA7 352 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 FAM185AQ8N0U4 392 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 OR51G1Q8NGK1 321 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ARFGEF3Q5TH69 2177 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 ROS1P08922 2347 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 TOX3O15405 576 aaPredicted RBP8.77□□□□□ -1
CDC42SE1-207ENST00000540998 HBE1P02100 147 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 GZMBP10144 247 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 TFF3Q07654 80 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 LPAL2Q16609 132 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 BTNL3Q6UXE8 466 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF664Q8N3J9 261 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 GPR87Q9BY21 358 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 OPA3Q9H6K4 179 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 DLL3Q9NYJ7 618 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 FUT9Q9Y231 359 aa8.77□□□□□ -1
CDC42SE1-207ENST00000540998 CLEC18AA5D8T8 446 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 CEACAM1P13688 526 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 G6PCP35575 357 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 CHRNA7P36544 502 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 ALKBH6Q3KRA9 238 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 ABLIM2Q6H8Q1 611 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 ZNF66Q6ZN08 573 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 H1FOOQ8IZA3 346 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 CLEC18CQ8NCF0 446 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 HIST1H2AAQ96QV6 131 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 SIRT7Q9NRC8 400 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 CISD1Q9NZ45 108 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 XKRY2A2RUG3 117 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 C9J4A7 227 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 IL18BPO95998 194 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 FKBP2P26885 142 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 SRD5A2P31213 254 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 UBE2G2P60604 165 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 CEACAM21Q3KPI0 293 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 LYSMD4Q5XG99 296 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 TPRX1Q8N7U7 411 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR2Y1Q8NGV0 311 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 GTF3AQ92664 365 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 SMDT1Q9H4I9 107 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 WASF3Q9UPY6 502 aa8.77□□□□□ -1.01
CDC42SE1-207ENST00000540998 MGAQ8IWI9 3026 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 EREGO14944 169 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 IGHV3-13P01766 116 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 IGHV3-7P01780 117 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR4A8P0C604 315 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 WNT5AP41221 380 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 CXCL12P48061 93 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR8G5Q8NG78 346 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR10A7Q8NGE5 316 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR4F5Q8NH21 305 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 MAFAQ8NHW3 353 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 SPSB4Q96A44 273 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR4F4Q96R69 305 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 DERL1Q9BUN8 251 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 A0A0U1RQK1 487 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 KIR2DS1A0A191URI9 304 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 DFFBO76075 338 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 KIR2DS4P43632 304 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 PCBD1P61457 104 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 RPL23P62829 140 aaKnown RBP8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 SLC38A11Q08AI6 406 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 FOXO1Q12778 655 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 KIR2DS1Q14954 304 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 TMEM105Q8N8V8 129 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 SLC39A9Q9NUM3 307 aa8.76□□□□□ -1.01
CDC42SE1-207ENST00000540998 GJE1A6NN92 205 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 CELA3BP08861 270 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 FOLR3P41439 243 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 RND2P52198 227 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 RPL30P62888 115 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms