RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 RAG2P55895 527 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 ERHP84090 104 aaKnown RBP8.14□□□□□ -1.11
TTC39C-203ENST00000540918 TNXAQ16473 311 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 HIST2H3PS2Q5TEC6 136 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 MUC15Q8N387 334 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 OR5P3Q8WZ94 311 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 PLEKHA2Q9HB19 425 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 GPR132Q9UNW8 380 aa8.14□□□□□ -1.11
TTC39C-203ENST00000540918 YLPM1P49750 1951 aaKnown RBP8.13□□□□□ -1.11
TTC39C-203ENST00000540918 ALX3O95076 343 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 CHRNB4P30926 498 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 P2RY4P51582 365 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 DHODHQ02127 395 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 TCF15Q12870 199 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 OR5D13Q8NGL4 314 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 C2CD4CQ8TF44 421 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 GTF3AQ92664 365 aaKnown RBP8.13□□□□□ -1.11
TTC39C-203ENST00000540918 FAM122AQ96E09 287 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 SLC35E1Q96K37 410 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 GPR137Q96N19 417 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 FOXD3Q9UJU5 478 aaPredicted RBP8.13□□□□□ -1.11
TTC39C-203ENST00000540918 PLXNB3Q9ULL4 1909 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 LRRK2Q5S007 2527 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 MFNGO00587 321 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 RBP4P02753 201 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 VDAC1P21796 283 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 TAGLN2P37802 199 aaKnown RBP8.13□□□□□ -1.11
TTC39C-203ENST00000540918 SVBPQ8N300 66 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 C17orf50Q8WW18 174 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 SYNGR2O43760 224 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 KLRB1Q12918 225 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 FAHD2BQ6P2I3 314 aaPredicted RBP8.13□□□□□ -1.11
TTC39C-203ENST00000540918 ACSM6Q6P461 480 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 PRSS54Q6PEW0 395 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 ZNF818PQ6ZRF7 136 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 MOB1BQ7L9L4 216 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 OR52M1Q8NGK5 317 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 FAHD2AQ96GK7 314 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 CHODLQ9H9P2 273 aa8.13□□□□□ -1.11
TTC39C-203ENST00000540918 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
TTC39C-203ENST00000540918 ODAMA1E959 279 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 C7orf66A4D0T2 115 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 ZNF787Q6DD87 383 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 FAM57AQ8TBR7 257 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 HARBI1Q96MB7 349 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 TMEM204Q9BSN7 226 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 GAL3ST2Q9H3Q3 398 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 INSIG2Q9Y5U4 225 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 NCOA6Q14686 2063 aaPredicted RBP8.12□□□□□ -1.11
TTC39C-203ENST00000540918 IGKV1-27A0A075B6S5 117 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 CPN1P15169 458 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 TBR1Q16650 682 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 PDZD11Q5EBL8 140 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 TGIF2LYQ8IUE0 185 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 TGIF2LXQ8IUE1 241 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 MRPL41Q8IXM3 137 aaKnown RBP8.12□□□□□ -1.11
TTC39C-203ENST00000540918 MDS2Q8NDY4 140 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 UNKLQ9H9P5 680 aaKnown RBP8.12□□□□□ -1.11
TTC39C-203ENST00000540918 A0A0A6YYD4 124 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 IGHV3-35A0A0C4DH35 117 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 UMAD1C9J7I0 102 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 SNAPINO95295 136 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 RPL39P5Q59GN2 51 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 OVCH2Q7RTZ1 564 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 HS3ST6Q96QI5 342 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 NIPSNAP3BQ9BS92 247 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 SFXN3Q9BWM7 321 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 LINC00470Q9BZP3 86 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 RHOFQ9HBH0 211 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 RNF115Q9Y4L5 304 aa8.12□□□□□ -1.11
TTC39C-203ENST00000540918 SPINK4O60575 86 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 DAOP14920 347 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 CD24P25063 80 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 F2RP25116 425 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 MDH2P40926 338 aaKnown RBP8.11□□□□□ -1.11
TTC39C-203ENST00000540918 GPR6P46095 362 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-203ENST00000540918 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 PTX4Q96A99 478 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 TMEM45BQ96B21 275 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 C14orf79Q96F83 325 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 MED30Q96HR3 178 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 C1QTNF5Q9BXJ0 243 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 MS4A7Q9GZW8 240 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-203ENST00000540918 PATZ1Q9HBE1 687 aaKnown RBP8.11□□□□□ -1.11
TTC39C-203ENST00000540918 LTBP2Q14767 1821 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 MELTFP08582 738 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 IGFBP3P17936 291 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-203ENST00000540918 ORM2P19652 201 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 GAMTQ14353 236 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 BVESQ8NE79 360 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 STARD4Q96DR4 205 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 CYYR1Q96J86 154 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 RHOVQ96L33 236 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 TP53RKQ96S44 253 aa8.11□□□□□ -1.11
TTC39C-203ENST00000540918 MRPL37Q9BZE1 423 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms