RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ABHD14AQ9BUJ0 271 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 Q9N2K0 584 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 SLC23A1Q9UHI7 598 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 MGAT4AQ9UM21 535 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 IGHV1-3A0A0C4DH29 117 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 SERPINE3A8MV23 424 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 MFNGO00587 321 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 HSPA12AO43301 675 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 YPEL1O60688 119 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 OR2F2O95006 317 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 IGKV1D-33P01593 117 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 IGKV1-33P01594 117 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 LPLP06858 475 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 FCGR3AP08637 254 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 SCTP09683 121 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 SMIM18P0DKX4 95 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 VSIG10L2P0DP72 767 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 TMEM11P17152 192 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 KRTAP10-3P60369 221 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 ARFRP1Q13795 201 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 HNF4GQ14541 408 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 ARSJQ5FYB0 599 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-215ENST00000540904 TREML4Q6UXN2 200 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 Q6ZS46 218 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 C16orf82Q7Z2V1 217 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 TGIF2LXQ8IUE1 241 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 DTX3Q8N9I9 347 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 OR2AK2Q8NG84 335 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 CFHR4Q92496 578 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 RBM14Q96PK6 669 aaKnown RBP7.38□□□□□ -1.23
SNHG1-215ENST00000540904 YPEL2Q96QA6 119 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 FUNDC2Q9BWH2 189 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 OR1A1Q9P1Q5 309 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 DNHD1Q96M86 4753 aa7.38□□□□□ -1.23
SNHG1-215ENST00000540904 FAM90A9PA6NNJ1 464 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 TRDCB7Z8K6 153 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 ZBTB25P24278 435 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 TALDO1P37837 337 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 RPS19P39019 145 aaKnown RBP7.37□□□□□ -1.23
SNHG1-215ENST00000540904 CEACAM6P40199 344 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 ZNF137PP52743 207 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 CDNFQ49AH0 187 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 ABCA11PQ4W5N1 156 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 THNSL2Q86YJ6 484 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 Q8N2B8 174 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 KLHDC1Q8N7A1 406 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 OR13F1Q8NGS4 319 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 OR5H6Q8NGV6 325 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 SGMS2Q8NHU3 365 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 MAFIPQ8WZ33 124 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 PHF21AQ96BD5 680 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 CITED1Q99966 193 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 PARP12Q9H0J9 701 aaKnown RBP7.37□□□□□ -1.23
SNHG1-215ENST00000540904 RHBDL2Q9NX52 303 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 ZNF230Q9UIE0 474 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-215ENST00000540904 ELF5Q9UKW6 265 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-215ENST00000540904 MOB4Q9Y3A3 225 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 ETV7Q9Y603 341 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 TENM1Q9UKZ4 2725 aa7.37□□□□□ -1.23
SNHG1-215ENST00000540904 SAA2-SAA4A0A096LPE2 208 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 IGKV1-6A0A0C4DH72 117 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 SH2D7A6NKC9 451 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-215ENST00000540904 ZNF736B4DX44 427 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-215ENST00000540904 M0QZK8 103 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 FABP7O15540 132 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 TXNL1O43396 289 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 LANCL1O43813 399 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 PEX14O75381 377 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 SCGNO76038 276 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 AMY1AP04745 511 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 AMY2AP04746 511 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 SAA2P0DJI9 122 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-215ENST00000540904 VDAC2P45880 294 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-215ENST00000540904 OR3A3P47888 321 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 SCAND1P57086 179 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 VBP1P61758 197 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 NCS1P62166 190 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 KIR2DS1Q14954 304 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 ARL6IP1Q15041 203 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 TMEM95Q3KNT9 176 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 IGSF11Q5DX21 431 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 LY6G6FQ5SQ64 297 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 C11orf88Q6PI97 169 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 ODF3L1Q8IXM7 274 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 C11orf44Q8N8P7 122 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 OR2T10Q8NGZ9 312 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 SLC25A38Q96DW6 304 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 RBMXL1Q96E39 390 aaKnown RBP7.36□□□□□ -1.23
SNHG1-215ENST00000540904 MRPS26Q9BYN8 205 aaKnown RBP7.36□□□□□ -1.23
SNHG1-215ENST00000540904 IFI27L2Q9H2X8 130 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 SERTAD4Q9NUC0 356 aa7.36□□□□□ -1.23
SNHG1-215ENST00000540904 TMEM235A6NFC5 223 aa7.35□□□□□ -1.23
SNHG1-215ENST00000540904 NCBP2LA6PVI3 153 aaKnown RBP7.35□□□□□ -1.23
SNHG1-215ENST00000540904 RAB29O14966 203 aa7.35□□□□□ -1.23
SNHG1-215ENST00000540904 BET1O15155 118 aa7.35□□□□□ -1.23
SNHG1-215ENST00000540904 MOSP00540 346 aa7.35□□□□□ -1.23
SNHG1-215ENST00000540904 GSTP1P09211 210 aaKnown RBP7.35□□□□□ -1.23
SNHG1-215ENST00000540904 GSTT2P0CG29 244 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms