RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF585BQ52M93 769 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 Q6P435 159 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 TMEM105Q8N8V8 129 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 STRADBQ9C0K7 418 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 WDR61Q9GZS3 305 aaKnown RBP10.42□□□□□ -0.74
NPC1-202ENST00000540608 OR51I2Q9H344 312 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 LOXL2Q9Y4K0 774 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 COL27A1Q8IZC6 1860 aaPredicted RBP10.42□□□□□ -0.74
NPC1-202ENST00000540608 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 CD81P60033 236 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 C6orf15Q6UXA7 325 aaPredicted RBP10.42□□□□□ -0.74
NPC1-202ENST00000540608 LILRB2Q8N423 598 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 OR2M7Q8NG81 312 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 OR4C12Q96R67 309 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 FAM173AQ9BQD7 235 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 PRDM13Q9H4Q3 707 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 DOCK10Q96BY6 2186 aa10.42□□□□□ -0.74
NPC1-202ENST00000540608 CEBPZOSA8MTT3 80 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 IFNA1P01562 189 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 CELA3AP09093 270 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 JMJD7P0C870 316 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 PDZD11Q5EBL8 140 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 MOB1BQ7L9L4 216 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 APH1AQ96BI3 265 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 ZNF703Q9H7S9 590 aaPredicted RBP10.41□□□□□ -0.74
NPC1-202ENST00000540608 LIN7CQ9NUP9 197 aaKnown RBP10.41□□□□□ -0.74
NPC1-202ENST00000540608 RHBDL1O75783 438 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 SPINK2P20155 84 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 APLNRP35414 380 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 WDR25Q64LD2 544 aaPredicted RBP10.41□□□□□ -0.74
NPC1-202ENST00000540608 GFOD1Q9NXC2 390 aa10.41□□□□□ -0.74
NPC1-202ENST00000540608 MAP1LC3B2A6NCE7 125 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 ZNF737O75373 536 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 WNT5AP41221 380 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 DEFA6Q01524 100 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 SPANXN5Q5MJ07 72 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 TAF15Q92804 592 aaKnown RBP eCLIP10.4□□□□□ -0.74
NPC1-202ENST00000540608 AGMATQ9BSE5 352 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 MAP1LC3BQ9GZQ8 125 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 RBKSQ9H477 322 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 TMEM9BQ9NQ34 198 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 B4GALT7Q9UBV7 327 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 RBM7Q9Y580 266 aaKnown RBP10.4□□□□□ -0.74
NPC1-202ENST00000540608 FREM1Q5H8C1 2179 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 TRAV39A0A0B4J263 110 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 FAM90A26D6RGX4 464 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 J3QT63 122 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 NEURL1O76050 574 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 PGA5P0DJD9 388 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 ZNF16P17020 682 aaPredicted RBP10.4□□□□□ -0.74
NPC1-202ENST00000540608 CA6P23280 308 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 ACP1P24666 158 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 GPX4P36969 197 aaPredicted RBP10.4□□□□□ -0.74
NPC1-202ENST00000540608 C4orf17Q53FE4 359 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 ZNF497Q6ZNH5 498 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 THOC3Q96J01 351 aaKnown RBP10.4□□□□□ -0.74
NPC1-202ENST00000540608 SSX3Q99909 188 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 HES7Q9BYE0 225 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 CDH20Q9HBT6 801 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 NAT8Q9UHE5 227 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 TIMM9Q9Y5J7 89 aa10.4□□□□□ -0.74
NPC1-202ENST00000540608 ZDBF2Q9HCK1 2354 aa10.4□□□□□ -0.75
NPC1-202ENST00000540608 FABP4P15090 132 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 CLN3Q13286 438 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 CENPVQ7Z7K6 275 aaPredicted RBP10.39□□□□□ -0.75
NPC1-202ENST00000540608 C1orf210Q8IVY1 113 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 PRR18Q8N4B5 295 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 SLC39A9Q9NUM3 307 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 PITPNC1Q9UKF7 332 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 KCNS2Q9ULS6 477 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 FGFRL1Q8N441 504 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 OR10A7Q8NGE5 316 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 LHX4Q969G2 390 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 FRYQ5TBA9 3013 aa10.39□□□□□ -0.75
NPC1-202ENST00000540608 ZNF407Q9C0G0 2248 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 OR2H2O95918 312 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 CEACAM6P40199 344 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 ELLP55199 621 aaPredicted RBP10.38□□□□□ -0.75
NPC1-202ENST00000540608 ZXDAP98168 799 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 SLC38A11Q08AI6 406 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 ZNF600Q6ZNG1 722 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 BEND4Q6ZU67 534 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 RPP25LQ8N5L8 163 aaKnown RBP10.38□□□□□ -0.75
NPC1-202ENST00000540608 OR1K1Q8NGR3 316 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 PRSS50Q9UI38 385 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 A0A1W2PR80 420 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 SIRPB1O00241 398 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 WDR1O75083 606 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 MEF2BQ02080 365 aaPredicted RBP10.38□□□□□ -0.75
NPC1-202ENST00000540608 CYP2G1PQ6ZSU1 146 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
NPC1-202ENST00000540608 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 SMIM7Q9BQ49 75 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 OR51B6Q9H340 312 aa10.38□□□□□ -0.75
NPC1-202ENST00000540608 SRD5A3Q9H8P0 318 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms