RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 HBE1P02100 147 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 MMP7P09237 267 aaPredicted RBP8.42□□□□□ -1.06
PHC1-208ENST00000540574 IRF2P14316 349 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 UCP2P55851 309 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 GFRA1P56159 465 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 ABLIM2Q6H8Q1 611 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 UBAC2Q8NBM4 344 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 MSI2Q96DH6 328 aaKnown RBP8.42□□□□□ -1.06
PHC1-208ENST00000540574 NUDT16L1Q9BRJ7 211 aaKnown RBP8.42□□□□□ -1.06
PHC1-208ENST00000540574 RIMS4Q9H426 269 aaPredicted RBP8.42□□□□□ -1.06
PHC1-208ENST00000540574 TNCP24821 2201 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 ARPC4-TTLL3A0A0A6YYG9 625 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 A0A1W2PPQ1 181 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 TMEM30CPA0ZSE6 113 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 AQP7O14520 342 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 WNT5AP41221 380 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 GLIPR1P48060 266 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 ZADH2Q8N4Q0 377 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 POM121L2Q96KW2 1035 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 ZNF705GA8MUZ8 300 aaPredicted RBP8.42□□□□□ -1.06
PHC1-208ENST00000540574 NUDT19A8MXV4 375 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 H3BQ15 152 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 RPS2P15880 293 aaKnown RBP8.42□□□□□ -1.06
PHC1-208ENST00000540574 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 LFNGQ8NES3 379 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 PPP1R35Q8TAP8 253 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 BOD1Q96IK1 185 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 FANCFQ9NPI8 374 aa8.42□□□□□ -1.06
PHC1-208ENST00000540574 RNF212BA8MTL3 300 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
PHC1-208ENST00000540574 ACTL6BO94805 426 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 YIF1AO95070 293 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 FAM157CP0CG43 387 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 CTRB1P17538 263 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 SNCAP37840 140 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 MPV17P39210 176 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 DLK1P80370 383 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 CTRB2Q6GPI1 263 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 ZNF880Q6PDB4 577 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 PLPPR1Q8TBJ4 325 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 KLF14Q8TD94 323 aaPredicted RBP8.41□□□□□ -1.06
PHC1-208ENST00000540574 MAP1LC3B2A6NCE7 125 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 EGR1P18146 543 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 RAB4BP61018 213 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 RND3P61587 244 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 HMGN3Q15651 99 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 USF2Q15853 346 aaPredicted RBP8.41□□□□□ -1.06
PHC1-208ENST00000540574 RBMS3Q6XE24 437 aaKnown RBP8.41□□□□□ -1.06
PHC1-208ENST00000540574 MOGAT3Q86VF5 341 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 ZNF610Q8N9Z0 462 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 MAP1LC3BQ9GZQ8 125 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 ARV1Q9H2C2 271 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 AUP1Q9Y679 476 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 DMDP11532 3685 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 ZNF98A6NK75 572 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 ETV2O00321 342 aaPredicted RBP8.41□□□□□ -1.06
PHC1-208ENST00000540574 PSG7Q13046 419 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 EIF3IQ13347 325 aaKnown RBP8.41□□□□□ -1.06
PHC1-208ENST00000540574 FGFRL1Q8N441 504 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 OR5P3Q8WZ94 311 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 CABLES2Q9BTV7 478 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 TMPRSS5Q9H3S3 457 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 RNF122Q9H9V4 155 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 SPRR3Q9UBC9 169 aa8.41□□□□□ -1.06
PHC1-208ENST00000540574 SPTBN4Q9H254 2564 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 TRAV24A0A0B4J272 114 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 TRAV17A0A0B4J275 112 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 CD55P08174 381 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 DANCRP0C864 163 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 CD200P41217 278 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 RAB5CP51148 216 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 FAM214BQ7L5A3 538 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 LYG1Q8N1E2 194 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 SNIP1Q8TAD8 396 aaKnown RBP8.4□□□□□ -1.06
PHC1-208ENST00000540574 PATZ1Q9HBE1 687 aaKnown RBP8.4□□□□□ -1.06
PHC1-208ENST00000540574 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
PHC1-208ENST00000540574 PQLC2LA1A4F0 135 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 FGF16O43320 207 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 HBZP02008 142 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 GAPDHP04406 335 aaKnown RBP8.4□□□□□ -1.06
PHC1-208ENST00000540574 COL10A1Q03692 680 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 FFAR4Q5NUL3 377 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 ZNF561Q8N587 486 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 ZNRF1Q8ND25 227 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 SSMEM1Q8WWF3 244 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 ZDHHC16Q969W1 377 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 RAB39BQ96DA2 213 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 GALNT14Q96FL9 552 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 PFDN5Q99471 154 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 ATP5SQ99766 215 aa8.4□□□□□ -1.06
PHC1-208ENST00000540574 BARX1Q9HBU1 254 aaPredicted RBP8.4□□□□□ -1.06
PHC1-208ENST00000540574 A0A0G2JRQ6 117 aa8.4□□□□□ -1.07
PHC1-208ENST00000540574 ENSAO43768 121 aaKnown RBP8.4□□□□□ -1.07
PHC1-208ENST00000540574 WISP2O76076 250 aa8.4□□□□□ -1.07
PHC1-208ENST00000540574 FTH1P19P0C7X4 201 aa8.4□□□□□ -1.07
PHC1-208ENST00000540574 APELAP0DMC3 54 aa8.4□□□□□ -1.07
PHC1-208ENST00000540574 SLC25A6P12236 298 aa8.4□□□□□ -1.07
PHC1-208ENST00000540574 CD59P13987 128 aa8.4□□□□□ -1.07
PHC1-208ENST00000540574 CFPP27918 469 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms