RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 H0YJW9 148 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF17P17021 662 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 CD70P32970 193 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 RHOAP61586 193 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 FMODQ06828 376 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 FOXL1Q12952 345 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 GAB4Q2WGN9 574 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 C12orf54Q6X4T0 127 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 TMEM252Q8N6L7 170 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 NUP43Q8NFH3 380 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 MBD3L1Q8WWY6 194 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 CITED1Q99966 193 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 CHRNA10Q9GZZ6 450 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 MOB1AQ9H8S9 216 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 WDR76Q9H967 626 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 SLC17A4Q9Y2C5 497 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 POLR1DQ9Y2S0 133 aa8.11□□□□□ -1.11
CLIP1-214ENST00000540539 A0A0A6YYD4 124 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 K7EP34 96 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 SIRPB1O00241 398 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 MPPED1O15442 326 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 C8orf89P0DMQ9 161 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 RPL24P83731 157 aaKnown RBP8.1□□□□□ -1.11
CLIP1-214ENST00000540539 ITPRIPL2Q3MIP1 535 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 RD3Q7Z3Z2 195 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 MTURNQ8N3F0 131 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 SGMS2Q8NHU3 365 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 CNRIP1Q96F85 164 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-214ENST00000540539 KCNS1Q96KK3 526 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 GPER1Q99527 375 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 CLEC7AQ9BXN2 247 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 TAAR3PQ9P1P4 343 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 A0A1W2PR80 420 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 A0A1W2PS18 150 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 NPIPA5E9PKD4 350 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 NPIPA3F8WFD2 350 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 TNFRSF13BO14836 293 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF737O75373 536 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 NRASP01111 189 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 KRASP01116 189 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 IFNA1P01562 189 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF20P17024 532 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 PGCP20142 388 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 DNASE1L1P49184 302 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-214ENST00000540539 OTPQ5XKR4 325 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 ODF3L1Q8IXM7 274 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 FAM58AQ8N1B3 248 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 GMPPAQ96IJ6 420 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-214ENST00000540539 RCHY1Q96PM5 261 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 SPXQ9BT56 116 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 ST6GALNAC5Q9BVH7 336 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 PECRQ9BY49 303 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 ELOVL3Q9HB03 270 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 NPIPA1Q9UND3 350 aa8.1□□□□□ -1.11
CLIP1-214ENST00000540539 KIAA1549Q9HCM3 1950 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 ATG2BQ96BY7 2078 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 KIAA1549LQ6ZVL6 1849 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 C1QTNF9BB2RNN3 333 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 SLC33A1O00400 549 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-214ENST00000540539 ARPC3O15145 178 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 LMX1BO60663 402 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF324O75467 553 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-214ENST00000540539 CISD3P0C7P0 127 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 LINC00869P0C866 280 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 HIST1H1DP16402 221 aaKnown RBP8.09□□□□□ -1.11
CLIP1-214ENST00000540539 TMEM187Q14656 261 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 C1orf140Q5VVS0 124 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 MFSD12Q6NUT3 480 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 DCAF4L2Q8NA75 395 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 MRPL30Q8TCC3 161 aaKnown RBP8.09□□□□□ -1.11
CLIP1-214ENST00000540539 CT55Q8WUE5 264 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 C19orf24Q9BVV8 132 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 DEC1Q9P2X7 70 aa8.09□□□□□ -1.11
CLIP1-214ENST00000540539 TCF20Q9UGU0 1960 aaKnown RBP8.09□□□□□ -1.11
CLIP1-214ENST00000540539 PHF3Q92576 2039 aaKnown RBP8.09□□□□□ -1.11
CLIP1-214ENST00000540539 F2RL2O00254 374 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 SOCS1O15524 211 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 VENTXO95231 258 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 GLI4P10075 376 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 CA7P43166 264 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 SNU13P55769 128 aaKnown RBP8.09□□□□□ -1.12
CLIP1-214ENST00000540539 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.12
CLIP1-214ENST00000540539 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.12
CLIP1-214ENST00000540539 PLCXD2Q0VAA5 305 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 NRN1LQ496H8 165 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 SMIM20Q8N5G0 67 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 OR5P3Q8WZ94 311 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 PELI2Q9HAT8 420 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 FAM60AQ9NP50 221 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 B9D1Q9UPM9 204 aa8.09□□□□□ -1.12
CLIP1-214ENST00000540539 SAA2-SAA4A0A096LPE2 208 aa8.08□□□□□ -1.12
CLIP1-214ENST00000540539 A0A0B4J2E0 115 aa8.08□□□□□ -1.12
CLIP1-214ENST00000540539 A0A1B0GWA3 101 aa8.08□□□□□ -1.12
CLIP1-214ENST00000540539 A0A1B0GX12 115 aa8.08□□□□□ -1.12
CLIP1-214ENST00000540539 MLNRO43193 412 aa8.08□□□□□ -1.12
CLIP1-214ENST00000540539 ZNF207O43670 478 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms