RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 VCX3BQ9H321 246 aa16.51■□□□□ 0.23
CHFR-217ENST00000540537 KCNK15Q9H427 330 aa16.51■□□□□ 0.23
CHFR-217ENST00000540537 NAPSAO96009 420 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 CRHBPP24387 322 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 THBS3P49746 956 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 RPS25P62851 125 aaKnown RBP16.5■□□□□ 0.23
CHFR-217ENST00000540537 ZNF880Q6PDB4 577 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 PRSS48Q7RTY5 328 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 C5orf24Q7Z6I8 188 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 MRPL41Q8IXM3 137 aaKnown RBP16.5■□□□□ 0.23
CHFR-217ENST00000540537 ODF3L1Q8IXM7 274 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 SVOPQ8N4V2 548 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 ABRACLQ9P1F3 81 aa16.5■□□□□ 0.23
CHFR-217ENST00000540537 NUDT19A8MXV4 375 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 SLC17A2O00624 439 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
CHFR-217ENST00000540537 ARL6IP5O75915 188 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 CPEP16870 476 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 BLVRBP30043 206 aaPredicted RBP16.49■□□□□ 0.23
CHFR-217ENST00000540537 F2RL1P55085 397 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 PNLIPRP3Q17RR3 467 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 C8orf86Q6ZUL3 223 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 MOB1BQ7L9L4 216 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 KLHL30-AS1Q8NEE0 82 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 GFI1Q99684 422 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 GPR61Q9BZJ8 451 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 LPAR5Q9H1C0 372 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 RIMS4Q9H426 269 aaPredicted RBP16.49■□□□□ 0.23
CHFR-217ENST00000540537 PLGRKTQ9HBL7 147 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 PLEKHJ1Q9NW61 149 aa16.49■□□□□ 0.23
CHFR-217ENST00000540537 A0A0A6YYD4 124 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 SOX6P35712 828 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 MYCNOSP40205 109 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 HSPA13P48723 471 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 ZNF833PQ6ZTB9 187 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 C18orf65Q6ZTR6 163 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 OR2AK2Q8NG84 335 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 HSPB9Q9BQS6 159 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 URM1Q9BTM9 101 aaKnown RBP16.48■□□□□ 0.23
CHFR-217ENST00000540537 MRPL20Q9BYC9 149 aaKnown RBP16.48■□□□□ 0.23
CHFR-217ENST00000540537 CCDC90BQ9GZT6 254 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 CHMP1AQ9HD42 196 aaPredicted RBP16.48■□□□□ 0.23
CHFR-217ENST00000540537 STEAP1Q9UHE8 339 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 ZNF580Q9UK33 172 aa16.48■□□□□ 0.23
CHFR-217ENST00000540537 TRBV6-6A0A0A6YYG2 114 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 ARSBP15848 533 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 FOXE3Q13461 319 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 P2RY14Q15391 338 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 MMDQ15546 238 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 CXorf66Q5JRM2 361 aaPredicted RBP16.47■□□□□ 0.23
CHFR-217ENST00000540537 FAM71F2Q6NXP2 309 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 ZNF695Q8IW36 515 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 FAM89BQ8N5H3 189 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 RNF152Q8N8N0 203 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 RBMXL1Q96E39 390 aaKnown RBP16.47■□□□□ 0.23
CHFR-217ENST00000540537 MGLLQ99685 303 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 NABP2Q9BQ15 211 aa16.47■□□□□ 0.23
CHFR-217ENST00000540537 AK6Q9Y3D8 172 aaKnown RBP16.47■□□□□ 0.23
CHFR-217ENST00000540537 SAA2-SAA4A0A096LPE2 208 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 IGF1P05019 195 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 ELANEP08246 267 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 SAA2P0DJI9 122 aaPredicted RBP16.46■□□□□ 0.23
CHFR-217ENST00000540537 RANBP1P43487 201 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 ACTBP60709 375 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 CFHR3Q02985 330 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 RAB11BQ15907 218 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 IL1F10Q8WWZ1 152 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 P2RX4Q99571 388 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 MCRIP2Q9BUT9 160 aaKnown RBP16.46■□□□□ 0.23
CHFR-217ENST00000540537 IFI27L2Q9H2X8 130 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 ZNF107Q9UII5 783 aaPredicted RBP16.46■□□□□ 0.23
CHFR-217ENST00000540537 HSF4Q9ULV5 492 aa16.46■□□□□ 0.23
CHFR-217ENST00000540537 FOXI3A8MTJ6 420 aaPredicted RBP16.45■□□□□ 0.22
CHFR-217ENST00000540537 SOCS1O15524 211 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 RPLP1P05386 114 aaKnown RBP16.45■□□□□ 0.22
CHFR-217ENST00000540537 VDAC1P21796 283 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 CALRP27797 417 aaKnown RBP16.45■□□□□ 0.22
CHFR-217ENST00000540537 MAP2K4P45985 399 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 OR3A3P47888 321 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 FABP5Q01469 135 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 EGFEM1PQ0D2K5 195 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 TBCEQ15813 527 aaPredicted RBP16.45■□□□□ 0.22
CHFR-217ENST00000540537 IZUMO2Q6UXV1 221 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 SETD6Q8TBK2 473 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 ZNF251Q9BRH9 671 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 CHCHD6Q9BRQ6 235 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 ACOT13Q9NPJ3 140 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 PIPOXQ9P0Z9 390 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 AK3Q9UIJ7 227 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 MGAT4AQ9UM21 535 aa16.45■□□□□ 0.22
CHFR-217ENST00000540537 ITGB1BP1O14713 200 aa16.44■□□□□ 0.22
CHFR-217ENST00000540537 IGHG4P01861 327 aa16.44■□□□□ 0.22
CHFR-217ENST00000540537 DPF1Q92782 380 aa16.44■□□□□ 0.22
CHFR-217ENST00000540537 SLC23A1Q9UHI7 598 aa16.44■□□□□ 0.22
CHFR-217ENST00000540537 BLOC1S6Q9UL45 172 aa16.44■□□□□ 0.22
CHFR-217ENST00000540537 RAB29O14966 203 aa16.43■□□□□ 0.22
CHFR-217ENST00000540537 NBR2O15453 112 aa16.43■□□□□ 0.22
CHFR-217ENST00000540537 ST8SIA5O15466 376 aa16.43■□□□□ 0.22
CHFR-217ENST00000540537 HLA-DRB1P01911 266 aa16.43■□□□□ 0.22
CHFR-217ENST00000540537 OR5H8P0DN80 308 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms