RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SCO2A0A1W2PP80 73 aa9.59□□□□□ -0.87
PBX1-212ENST00000540236 EMC4Q5J8M3 183 aa9.59□□□□□ -0.87
PBX1-212ENST00000540236 OSR2Q8N2R0 312 aa9.59□□□□□ -0.87
PBX1-212ENST00000540236 TRIB1Q96RU8 372 aa9.59□□□□□ -0.87
PBX1-212ENST00000540236 C22orf46C9J442 243 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 H0Y8X5 98 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 PLPP3O14495 311 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 METRNLQ641Q3 311 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
PBX1-212ENST00000540236 LINC00696Q6ZRV3 163 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 RNASEH2CQ8TDP1 164 aaKnown RBP9.58□□□□□ -0.88
PBX1-212ENST00000540236 MRGPRDQ8TDS7 321 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 HCRTR1O43613 425 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 BGLAPP02818 100 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 PAX2Q02962 417 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 HHEXQ03014 270 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 SSPNQ14714 243 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 SFTPA1Q8IWL2 248 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 ALKBH4Q9NXW9 302 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 SYNGR4O95473 234 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 HMGA1P17096 107 aaKnown RBP9.58□□□□□ -0.88
PBX1-212ENST00000540236 FOXA3P55318 350 aaPredicted RBP9.58□□□□□ -0.88
PBX1-212ENST00000540236 TFF3Q07654 80 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 FRMPD3Q5JV73 1810 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 TRAV30A0A087WSZ9 112 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 C5orf49A4QMS7 147 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 TCN2P20062 427 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 PRAMEF5Q5TYX0 476 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 PRAMEF6Q5VXH4 476 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 ARHGEF39Q8N4T4 335 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 OR4D5Q8NGN0 318 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 KLHDC7BQ96G42 594 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 JKAMPQ9P055 326 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 RALGAPA2Q2PPJ7 1873 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 TEX50A0A1B0GTY4 177 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 RAB35Q15286 201 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 FAM169BQ8N8A8 192 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 OR4P4Q8NGL7 312 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
PBX1-212ENST00000540236 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 FZR1Q9UM11 496 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 HS3ST2Q9Y278 367 aa9.58□□□□□ -0.88
PBX1-212ENST00000540236 ABHD16AO95870 558 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 VAX1Q5SQQ9 334 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 PQLC2Q6ZP29 291 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 CPT1CQ8TCG5 803 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 ZNF319Q9P2F9 582 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 NRG2O14511 850 aaPredicted RBP9.57□□□□□ -0.88
PBX1-212ENST00000540236 SELPP16109 830 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 SGCBQ16585 318 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 TUBD1Q9UJT1 453 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 PLXND1Q9Y4D7 1925 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 CTSBP07858 339 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 WDR34Q96EX3 536 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 DUSP15Q9H1R2 295 aaPredicted RBP9.57□□□□□ -0.88
PBX1-212ENST00000540236 SMDT1Q9H4I9 107 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 FAM60AQ9NP50 221 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 IGKV1-8A0A0C4DH67 115 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 TMEM191AQ9H0A3 160 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 CDH20Q9HBT6 801 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 ZNF581Q9P0T4 197 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 B4GALT7Q9UBV7 327 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 TBC1D29Q9UFV1 150 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 A0A1W2PPV9 198 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 PPYP01298 95 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 SPSB3Q6PJ21 355 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 NUDT16L1Q9BRJ7 211 aaKnown RBP9.57□□□□□ -0.88
PBX1-212ENST00000540236 TMEM106CQ9BVX2 250 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 HS3ST3A1Q9Y663 406 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
PBX1-212ENST00000540236 SYNGR2O43760 224 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 ZNF217O75362 1048 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 CD24P25063 80 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 C17orf99Q6UX52 265 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 C5orf17Q8NAS9 161 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 OR4S2Q8NH73 311 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 SSC5DA1L4H1 1573 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 CCL2P13500 99 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 WDFY1Q8IWB7 410 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 KCNIP2Q9NS61 270 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 MCM3APO60318 1980 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 PRSS38A1L453 326 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 KLF7O75840 302 aaPredicted RBP9.56□□□□□ -0.88
PBX1-212ENST00000540236 SLC35E2P0CK97 266 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 CA7P43166 264 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 QTRT1Q9BXR0 403 aaKnown RBP9.56□□□□□ -0.88
PBX1-212ENST00000540236 RNASE7Q9H1E1 156 aaKnown RBP9.56□□□□□ -0.88
PBX1-212ENST00000540236 SHANK3Q9BYB0 1731 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 GOLGB1Q14789 3259 aaKnown RBP9.56□□□□□ -0.88
PBX1-212ENST00000540236 PPIAL4EA0A075B759 164 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 RPL36A-HNRNPH2H7BZ11 118 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 SLC25A17O43808 307 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 ARL14EPLP0DKL9 152 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 PPIAL4FP0DN26 164 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 PPP1CAP62136 330 aa9.56□□□□□ -0.88
PBX1-212ENST00000540236 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms