RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CD36P16671 472 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 IL3RAP26951 378 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 HLA-DRB3P79483 266 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 EBI3Q14213 229 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 IZUMO1Q8IYV9 350 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 Q8N6K4 173 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 C5orf56Q8N8D9 126 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 DTX3Q8N9I9 347 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 EAF1Q96JC9 268 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-212ENST00000540230 YPEL2Q96QA6 119 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 CMSS1Q9BQ75 279 aaKnown RBP11.97□□□□□ -0.49
UBE3B-212ENST00000540230 Q9N2K0 584 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 C12orf4Q9NQ89 552 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 LOC100506127A0A0U1RQW1 187 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 NOTOA8MTQ0 251 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 SCTP09683 121 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 RAB6AP20340 208 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 SDC2P34741 201 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 MXD1Q05195 221 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 C9orf152Q5JTZ5 239 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 STEAP3Q658P3 488 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 C10orf99Q6UWK7 81 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 MOB1BQ7L9L4 216 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 RAB3CQ96E17 227 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 CENPOQ9BU64 300 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 IFI27L2Q9H2X8 130 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 ABRACLQ9P1F3 81 aa11.96□□□□□ -0.49
UBE3B-212ENST00000540230 ELF5Q9UKW6 265 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-212ENST00000540230 A0A075B6Q4 140 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 IGKV1-6A0A0C4DH72 117 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 MFNGO00587 321 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 ST8SIA5O15466 376 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 FBXO24O75426 580 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.5
UBE3B-212ENST00000540230 GNB3P16520 340 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 TGFBR1P36897 503 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 OR3A3P47888 321 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 OR10R2Q8NGX6 335 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 KCTD7Q96MP8 289 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.5
UBE3B-212ENST00000540230 RIMS4Q9H426 269 aaPredicted RBP11.96□□□□□ -0.5
UBE3B-212ENST00000540230 DAPK2Q9UIK4 370 aa11.96□□□□□ -0.5
UBE3B-212ENST00000540230 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 ADARB2-AS1A8MUL3 147 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 LANCL1O43813 399 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 PEX14O75381 377 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-212ENST00000540230 HIST1H1DP16402 221 aaKnown RBP11.95□□□□□ -0.5
UBE3B-212ENST00000540230 CD1BP29016 333 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 LSAMPQ13449 338 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 LY6G6FQ5SQ64 297 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 SFXN4Q6P4A7 337 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 TPRA1Q86W33 373 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-212ENST00000540230 MAFIPQ8WZ33 124 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 MRPL20Q9BYC9 149 aaKnown RBP11.95□□□□□ -0.5
UBE3B-212ENST00000540230 MMP27Q9H306 513 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 SLC23A1Q9UHI7 598 aa11.95□□□□□ -0.5
UBE3B-212ENST00000540230 M0QZK8 103 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 FGF16O43320 207 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 TXNL1O43396 289 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 RGS11O94810 467 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 TNFAIP8O95379 198 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 CSF1P09603 554 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 RANBP1P43487 201 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 TCTEX1D4Q5JR98 221 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 ZNF833PQ6ZTB9 187 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 Q8N9W7 124 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 TSPAN14Q8NG11 270 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 OR2AK2Q8NG84 335 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 OR2T10Q8NGZ9 312 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 PTX4Q96A99 478 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 NABP2Q9BQ15 211 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 ZNF251Q9BRH9 671 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 ATG5Q9H1Y0 275 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 PLSCR3Q9NRY6 295 aa11.94□□□□□ -0.5
UBE3B-212ENST00000540230 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-212ENST00000540230 MEGF8Q7Z7M0 2845 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 FCGR3AP08637 254 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 CD3GP09693 182 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 F2RL1P55085 397 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 NSUN5P1Q3KNT7 163 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 RPL39P5Q59GN2 51 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 OR5AU1Q8NGC0 362 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 YIPF6Q96EC8 236 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 NOL4LQ96MY1 436 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-212ENST00000540230 AGMATQ9BSE5 352 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
UBE3B-212ENST00000540230 A0A087WXM4 84 aa11.92□□□□□ -0.5
UBE3B-212ENST00000540230 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
UBE3B-212ENST00000540230 MOSP00540 346 aa11.92□□□□□ -0.5
UBE3B-212ENST00000540230 CEACAM6P40199 344 aa11.92□□□□□ -0.5
UBE3B-212ENST00000540230 CENPVQ7Z7K6 275 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-212ENST00000540230 OR5H6Q8NGV6 325 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms