RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SPRY3O43610 288 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 DEDDO75618 318 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 FBP1P09467 338 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 SCTP09683 121 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 TCL1AP56279 114 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 VAMP8Q9BV40 100 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 SF3B5Q9BWJ5 86 aaKnown RBP8.61□□□□□ -1.03
TRAF1-202ENST00000540010 FAM206AQ9NX38 181 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 PINLYPA6NC86 204 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 RNF222A6NCQ9 220 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 C3orf80F5H4A9 247 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 PAGE4O60829 102 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CNIH1O95406 144 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 PNRC1Q12796 327 aaPredicted RBP8.61□□□□□ -1.03
TRAF1-202ENST00000540010 HES1Q14469 280 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 LYG1Q8N1E2 194 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CISD2Q8N5K1 135 aaKnown RBP8.61□□□□□ -1.03
TRAF1-202ENST00000540010 SSMEM1Q8WWF3 244 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 HEXA-AS1Q9H8Q6 139 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 HIF1ANQ9NWT6 349 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 TRAV14DV4A0A0A6YYC5 116 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 M0R1B8 84 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 DNPH1O43598 174 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CT45A6P0DMU7 189 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CT45A5P0DMU8 189 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CT45A7P0DMV0 189 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 FOSL1P15407 271 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 GNG10P50151 68 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 SUCLG1P53597 346 aaKnown RBP8.61□□□□□ -1.03
TRAF1-202ENST00000540010 TAS2R45P59539 299 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 GNB1P62873 340 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 VAMP3Q15836 100 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 SMIM21Q3B7S5 101 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CT45A1Q5HYN5 189 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 CT45A3Q8NHU0 189 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 ADAMTS17Q8TE56 1095 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 NEIL1Q96FI4 390 aaPredicted RBP8.61□□□□□ -1.03
TRAF1-202ENST00000540010 AQP10Q96PS8 301 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM204Q9BSN7 226 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF355PQ9NSJ1 428 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 DECR2Q9NUI1 292 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 OR5H1A6NKK0 313 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 CD8AP01732 235 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TPRX1Q8N7U7 411 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 OR2H1Q9GZK4 316 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TINAGQ9UJW2 476 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF835Q9Y2P0 537 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TRGV5A0A0B4J1U4 118 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 C11orf94C9JXX5 98 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 GYPAP02724 150 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 CD74P04233 296 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 GAPDHP04406 335 aaKnown RBP8.6□□□□□ -1.03
TRAF1-202ENST00000540010 CST2P09228 141 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 PAX6P26367 422 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 MEOX1P50221 254 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 SNAI3Q3KNW1 292 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM211Q6ICI0 200 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 GLRX5Q86SX6 157 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 OR10S1Q8NGN2 331 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 EML6Q6ZMW3 1958 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 SNRPCP09234 159 aaKnown RBP8.6□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF708P17019 499 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 HLA-GP17693 338 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TPPP2P59282 170 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TAAR6Q96RI8 345 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TTTY12Q9BZ98 90 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 SPRY4Q9C004 299 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM38BQ9NVV0 291 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 DOK5Q9P104 306 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 KIAA1456Q9P272 454 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 NAT8Q9UHE5 227 aa8.6□□□□□ -1.03
TRAF1-202ENST00000540010 LINC01387J3KSC0 135 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 CHEK1O14757 476 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 NEURL1O76050 574 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 CELA3AP09093 270 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 G6PCP35575 357 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 AMTP48728 403 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 CASP6P55212 293 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 PSG4Q00888 419 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 AARDQ4LEZ3 155 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 WDR25Q64LD2 544 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-202ENST00000540010 OR10X1Q8NGY0 326 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 MRPL30Q8TCC3 161 aaKnown RBP8.59□□□□□ -1.03
TRAF1-202ENST00000540010 CORO2AQ92828 525 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 CACFD1Q9UGQ2 172 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 NPTNQ9Y639 398 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM14DPA8MWL7 114 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-202ENST00000540010 SELEP16581 610 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 CAMPP49913 170 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 ERHP84090 104 aaKnown RBP8.59□□□□□ -1.03
TRAF1-202ENST00000540010 HFEQ30201 348 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF343Q6P1L6 599 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 HIST1H2BAQ96A08 127 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 SCGB2A1O75556 95 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 NAT2P11245 290 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 B3GALT5-AS1P59052 145 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 FAM27BQ5VT28 67 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms