RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PLGLAQ15195 96 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 RBM48Q5RL73 367 aaKnown RBP11.98□□□□□ -0.49
UBE3B-211ENST00000539843 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-211ENST00000539843 FAM71F2Q6NXP2 309 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 MOB1BQ7L9L4 216 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF485Q8NCK3 441 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 OR11H1Q8NG94 326 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 OR52L2PQ8NGH6 319 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 KCNG3Q8TAE7 436 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 IL1F10Q8WWZ1 152 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 UBE2E2Q96LR5 201 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 OR51J1Q9H342 316 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 PIPOXQ9P0Z9 390 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 PSORS1C1Q9UIG5 152 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 DNAH3Q8TD57 4116 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 TRAV41A0A0B4J266 112 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 CD40LGP29965 261 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 CFHR3Q02985 330 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 GABPB1Q06547 395 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-211ENST00000539843 RCN1Q15293 331 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF260Q3ZCT1 412 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 LIN54Q6MZP7 749 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 SETD6Q8TBK2 473 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
UBE3B-211ENST00000539843 PHYHIPQ92561 330 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 MRPL20Q9BYC9 149 aaKnown RBP11.97□□□□□ -0.49
UBE3B-211ENST00000539843 GHITMQ9H3K2 345 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 RIMS4Q9H426 269 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-211ENST00000539843 PLCXD1Q9NUJ7 323 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 RNF150Q9ULK6 438 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 MGAT4AQ9UM21 535 aa11.97□□□□□ -0.49
UBE3B-211ENST00000539843 RAB29O14966 203 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 LY86O95711 162 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 BPNT1O95861 308 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 VHLP40337 213 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF616Q08AN1 781 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 TMEM267Q0VDI3 215 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-211ENST00000539843 GNMTQ14749 295 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 C5orf64Q2M2E5 130 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 ACSM3Q53FZ2 586 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 HSD17B12Q53GQ0 312 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 FAM27D1Q5T7N8 215 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 NANOGP1Q8N7R0 232 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 OR1N2Q8NGR9 330 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 NABP2Q9BQ15 211 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 URM1Q9BTM9 101 aaKnown RBP11.96□□□□□ -0.49
UBE3B-211ENST00000539843 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 SCN3BQ9NY72 215 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF256Q9Y2P7 627 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-211ENST00000539843 WSB1Q9Y6I7 421 aa11.96□□□□□ -0.49
UBE3B-211ENST00000539843 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 OR5H14A6NHG9 310 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
UBE3B-211ENST00000539843 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-211ENST00000539843 HTR2CP28335 458 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 MC5RP33032 325 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 RPS27AP62979 156 aaKnown RBP11.95□□□□□ -0.5
UBE3B-211ENST00000539843 FHL3Q13643 280 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 EDARADDQ8WWZ3 215 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 PRR25Q96S07 402 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 TMED9Q9BVK6 235 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 U3KQK5 164 aa11.95□□□□□ -0.5
UBE3B-211ENST00000539843 H7C2Y5 167 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 HSPA12AO43301 675 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 RBBP9O75884 186 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 CHATP28329 748 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 RUNX1Q01196 453 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 MED22Q15528 200 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 HMGN3Q15651 99 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 PYHIN1Q6K0P9 492 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 ZNF429Q86V71 674 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 ZNF491Q8N8L2 437 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 NPBQ8NG41 125 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 OR6M1Q8NGM8 313 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 SULT4A1Q9BR01 284 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 FAAP24Q9BTP7 215 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 SLC23A1Q9UHI7 598 aa11.94□□□□□ -0.5
UBE3B-211ENST00000539843 IGHV7-81A0A0B4J1V7 117 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 G3V318 75 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 CDK1P06493 297 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 SRMP19623 302 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 BLVRBP30043 206 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-211ENST00000539843 PPIFP30405 207 aaKnown RBP11.93□□□□□ -0.5
UBE3B-211ENST00000539843 OR3A3P47888 321 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 RAB9AP51151 201 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 C1orf100Q5SVJ3 147 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 C6orf141Q5SZD1 244 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms