RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 IGLV1-47P01700 117 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 SLC2A2P11168 524 aaPredicted RBP11.88□□□□□ -0.51
USB1-203ENST00000539737 LTC4SQ16873 150 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 CROCCP3Q8IVE0 287 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 RFESDQ8TAC1 157 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 BIRC6Q9NR09 4857 aa11.88□□□□□ -0.51
USB1-203ENST00000539737 SDCBPO00560 298 aaPredicted RBP11.87□□□□□ -0.51
USB1-203ENST00000539737 SCGNO76038 276 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 NAPSAO96009 420 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 LPLP06858 475 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 PLA2G7Q13093 441 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 ARL6IP1Q15041 203 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 Q3ZCU0 254 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 ETV3LQ6ZN32 361 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 LGALS14Q8TCE9 139 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 RAB3CQ96E17 227 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 ARHGAP5-AS1Q96IT6 56 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 FUNDC2Q9BWH2 189 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 PECRQ9BY49 303 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 MGAT4AQ9UM21 535 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
USB1-203ENST00000539737 TRBV6-6A0A0A6YYG2 114 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 J3QR06 171 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 HBZP02008 142 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 CLEC2LP0C7M8 214 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 RCC1P18754 421 aaPredicted RBP11.86□□□□□ -0.51
USB1-203ENST00000539737 MRPS15P82914 257 aaKnown RBP11.86□□□□□ -0.51
USB1-203ENST00000539737 UTF1Q5T230 341 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 IDNKQ5T6J7 187 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 CENPVQ7Z7K6 275 aaPredicted RBP11.86□□□□□ -0.51
USB1-203ENST00000539737 PRR18Q8N4B5 295 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 OR10R2Q8NGX6 335 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 TAF9BQ9HBM6 251 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 GFOD1Q9NXC2 390 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 ABRACLQ9P1F3 81 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 GNG12Q9UBI6 72 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 AK3Q9UIJ7 227 aa11.86□□□□□ -0.51
USB1-203ENST00000539737 SERPINE3A8MV23 424 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 BUB1B-PAK6H3BSN5 160 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 M0QZK8 103 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 SNRPBP14678 240 aaKnown RBP11.85□□□□□ -0.51
USB1-203ENST00000539737 GNG10P50151 68 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 TMEM50BP56557 158 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 LSM3P62310 102 aaKnown RBP11.85□□□□□ -0.51
USB1-203ENST00000539737 MADCAM1Q13477 382 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 HMGN3Q15651 99 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 PLAC9Q5JTB6 97 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 GPR141Q7Z602 305 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 UBALD1Q8TB05 177 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 SETD6Q8TBK2 473 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 LEAP2Q969E1 77 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 RPEQ96AT9 228 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 ASCL2Q99929 193 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 CMSS1Q9BQ75 279 aaKnown RBP11.85□□□□□ -0.51
USB1-203ENST00000539737 ATG5Q9H1Y0 275 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 JPT1Q9UK76 154 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 PSG11Q9UQ72 335 aa11.85□□□□□ -0.51
USB1-203ENST00000539737 RAB27BO00194 218 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 MFNGO00587 321 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 RGS11O94810 467 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 GABARAPO95166 117 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 AMY1AP04745 511 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 AMY2AP04746 511 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 CD3GP09693 182 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 FAM106CPP0CH98 169 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 HIST1H1DP16402 221 aaKnown RBP11.84□□□□□ -0.51
USB1-203ENST00000539737 IL3RAP26951 378 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 TGFBR1P36897 503 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 HTD2P86397 168 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 MOGAT2Q3SYC2 334 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 TPTE2P1Q5T6R2 138 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 STEAP3Q658P3 488 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
USB1-203ENST00000539737 LINC00311Q8N616 119 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 TOMM40LQ969M1 308 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 GALMQ96C23 342 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
USB1-203ENST00000539737 CYYR1Q96J86 154 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 SLC25A33Q9BSK2 321 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 RHBDL2Q9NX52 303 aa11.84□□□□□ -0.51
USB1-203ENST00000539737 TSSC4Q9Y5U2 329 aaPredicted RBP11.84□□□□□ -0.51
USB1-203ENST00000539737 IGHV3-43A0A0B4J1X8 118 aa11.83□□□□□ -0.52
USB1-203ENST00000539737 OR2F2O95006 317 aa11.83□□□□□ -0.52
USB1-203ENST00000539737 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
USB1-203ENST00000539737 IGHV3-43DP0DP04 118 aa11.83□□□□□ -0.52
USB1-203ENST00000539737 ALDH3B2P48448 385 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms