RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PAX1P15863 534 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 FAM3BP58499 235 aaPredicted RBP11.24□□□□□ -0.61
UBE3B-209ENST00000539584 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF585BQ52M93 769 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 DCAF12Q5T6F0 453 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 Q6P435 159 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 REC114Q7Z4M0 266 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 NANOS1Q8WY41 292 aaKnown RBP11.24□□□□□ -0.61
UBE3B-209ENST00000539584 S100PBPQ96BU1 408 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 OR4C12Q96R67 309 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 SMIM7Q9BQ49 75 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 RBKSQ9H477 322 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 RBM7Q9Y580 266 aaKnown RBP11.24□□□□□ -0.61
UBE3B-209ENST00000539584 A0A096LPE4 126 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 A0A1W2PPZ6 126 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 VENTXO95231 258 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 CER1O95813 267 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 IAPPP10997 89 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 OTX2P32243 289 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 CLDN18P56856 261 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 CLN3Q13286 438 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 BSXQ3C1V8 233 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 CDCP2Q5VXM1 449 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 PEAR1Q5VY43 1037 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 C5orf24Q7Z6I8 188 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 HAPLN4Q86UW8 402 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 TUSC5Q8IXB3 177 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 IL1F10Q8WWZ1 152 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 RTL8AQ9BWD3 113 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 ACTR3CQ9C0K3 210 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF703Q9H7S9 590 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 HSPB7Q9UBY9 170 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 SLC33A1O00400 549 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 NGFP01138 241 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 FGF7P21781 194 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 TNFRSF9Q07011 255 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 GFI1BQ5VTD9 330 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 FGFRL1Q8N441 504 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 CIB3Q96Q77 187 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 GPR87Q9BY21 358 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
UBE3B-209ENST00000539584 CRIM1Q9NZV1 1036 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 TRAPPC2LQ9UL33 140 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 LAMP3Q9UQV4 416 aa11.23□□□□□ -0.61
UBE3B-209ENST00000539584 MKRN2OSH3BPM6 223 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 GCGP01275 180 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 PGA5P0DJD9 388 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 CCL2P13500 99 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 DDTP30046 118 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF146Q15072 292 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 SLC23A3Q6PIS1 610 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 DBX2Q6ZNG2 339 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
UBE3B-209ENST00000539584 OR2M7Q8NG81 312 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 OR4X1Q8NH49 305 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 C14orf144Q96I85 54 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 NOL4LQ96MY1 436 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-209ENST00000539584 OR1A1Q9P1Q5 309 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 ABI3Q9P2A4 366 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 PPP1R3CQ9UQK1 317 aa11.22□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM265A0A087WTH1 108 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 PINLYPA6NC86 204 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 H7BYZ3 331 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.61
UBE3B-209ENST00000539584 PDLIM4P50479 330 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 FGF8P55075 233 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-209ENST00000539584 ERVK11-1P61568 191 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 ACOT6Q3I5F7 207 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-209ENST00000539584 C6orf15Q6UXA7 325 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF645Q8N7E2 425 aa11.21□□□□□ -0.61
UBE3B-209ENST00000539584 SH2D1BO14796 132 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 HRASP01112 189 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 CFIP05156 583 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 COX5AP20674 150 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 IL2RGP31785 369 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 CATR1Q13166 79 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 GAMTQ14353 236 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 ADIRFQ15847 76 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 FIP1L1Q6UN15 594 aaKnown RBP11.21□□□□□ -0.62
UBE3B-209ENST00000539584 SSX7Q7RTT5 188 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 DRAM1Q8N682 238 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 OR1P1Q8NH06 330 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 SNX22Q96L94 193 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.62
UBE3B-209ENST00000539584 KCNIP1Q9NZI2 227 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 KCNS2Q9ULS6 477 aa11.21□□□□□ -0.62
UBE3B-209ENST00000539584 WDR1O75083 606 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 CLDN1O95832 211 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 OR2H2O95918 312 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 TYMSP04818 313 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 CD99P14209 185 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms