RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 RHBDL1O75783 438 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 ZNF883P0CG24 379 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 ACP1P24666 158 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 CEACAM21Q3KPI0 293 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 REC114Q7Z4M0 266 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 OR10G4Q8NGN3 311 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 RAB40CQ96S21 281 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 C9J4A7 227 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 ZNF737O75373 536 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 IGLV2-14P01704 120 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 SNRPCP09234 159 aaKnown RBP17.22■□□□□ 0.35
TMEM260-203ENST00000539559 GDF1P27539 372 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 OTX2P32243 289 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 TSTD3H0UI37 97 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 IFNL4K9M1U5 179 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 AMBPP02760 352 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 CD81P60033 236 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 Q0VFX4 171 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 PNRC1Q12796 327 aaPredicted RBP17.22■□□□□ 0.35
TMEM260-203ENST00000539559 COLCA1Q6ZS62 124 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 OR5T1Q8NG75 326 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 OR10A7Q8NGE5 316 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 TECTBQ96PL2 329 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 SLC25A22Q9H936 323 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 VAX2Q9UIW0 290 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 DNAJC13O75165 2243 aa17.22■□□□□ 0.35
TMEM260-203ENST00000539559 WDR1O75083 606 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 APLNRP35414 380 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 MBD3L1Q8WWY6 194 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 LHX4Q969G2 390 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 GPR87Q9BY21 358 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 MED12LQ86YW9 2145 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 MRPL33O75394 65 aaKnown RBP17.21■□□□□ 0.35
TMEM260-203ENST00000539559 NCR3LG1Q68D85 454 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 FAM53AQ6NSI3 398 aaPredicted RBP17.21■□□□□ 0.35
TMEM260-203ENST00000539559 DBX2Q6ZNG2 339 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 VASH2Q86V25 355 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 RPP25LQ8N5L8 163 aaKnown RBP17.21■□□□□ 0.35
TMEM260-203ENST00000539559 IL22RA2Q969J5 263 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 WFIKKN1Q96NZ8 548 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 CDH20Q9HBT6 801 aa17.21■□□□□ 0.35
TMEM260-203ENST00000539559 TRBV24-1A0A075B6N3 115 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A10PA6NDY2 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A18PA6NE21 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A16PA6NEW6 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A20PA6NIJ5 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A8PA6NJQ4 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A7PA6NKC0 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A22PA8MWA6 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A12PA8MX19 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A5PA8MXJ8 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A23PA8MXZ1 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A15PP0C7V4 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A13PP0C7W8 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A14PP0C7W9 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 FAM90A24PP0C7X0 464 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 LRRC75BQ2VPJ9 315 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 RIPPLY2Q5TAB7 128 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 OR10V1Q8NGI7 309 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 MISP3Q96FF7 219 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 ZNF705GA8MUZ8 300 aaPredicted RBP17.2■□□□□ 0.34
TMEM260-203ENST00000539559 OPN1MWP04001 364 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 OPN1MW2P0DN77 364 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 OPN1MW3P0DN78 364 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 GZMBP10144 247 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 SELLP14151 372 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 RNPS1Q15287 305 aaKnown RBP17.2■□□□□ 0.34
TMEM260-203ENST00000539559 ZNF585BQ52M93 769 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 SPATA46Q5T0L3 261 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 KCNE4Q8WWG9 221 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 HIPK2Q9H2X6 1198 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 PITPNC1Q9UKF7 332 aa17.2■□□□□ 0.34
TMEM260-203ENST00000539559 CTXN2P0C2S0 81 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 BMP5P22003 454 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 TUSC5Q8IXB3 177 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 OR2Y1Q8NGV0 311 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 PCGF1Q9BSM1 259 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 WDR61Q9GZS3 305 aaKnown RBP17.19■□□□□ 0.34
TMEM260-203ENST00000539559 SLC39A9Q9NUM3 307 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 TMEM242Q9NWH2 141 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 DLL3Q9NYJ7 618 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 DNPH1O43598 174 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 CELA3AP09093 270 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 S100GP29377 79 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 TMEM41BQ5BJD5 291 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 MRGPRGQ86SM5 289 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 POM121Q96HA1 1249 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 HIST1H2AAQ96QV6 131 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 PRSS50Q9UI38 385 aa17.19■□□□□ 0.34
TMEM260-203ENST00000539559 GTF3C1Q12789 2109 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 CACNA1DQ01668 2161 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 A0A1W2PPQ1 181 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 SIRPB1O00241 398 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 TMEM183AQ8IXX5 376 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 XKRY2A2RUG3 117 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 B4E171 279 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 PFN1P07737 140 aaKnown RBP17.18■□□□□ 0.34
TMEM260-203ENST00000539559 TSPAN7P41732 249 aa17.18■□□□□ 0.34
TMEM260-203ENST00000539559 SRSF7Q16629 238 aaKnown RBP eCLIP17.18■□□□□ 0.34
TMEM260-203ENST00000539559 SPINK14Q6IE38 97 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms