RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 BOKQ9UMX3 212 aaPredicted RBP8.2□□□□□ -1.1
CDH13-204ENST00000539548 SPEGQ15772 3267 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
CDH13-204ENST00000539548 ZNF407Q9C0G0 2248 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
CDH13-204ENST00000539548 IFNA10P01566 189 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 SERPINA7P05543 415 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 JMJD7P0C870 316 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 LHX2P50458 406 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 PLP2Q04941 152 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 CLN3Q13286 438 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 GAMTQ14353 236 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 TMEM241Q24JQ0 296 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 C4orf17Q53FE4 359 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 CYP2G1PQ6ZSU1 146 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 C17orf78Q8N4C9 275 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 OR4X1Q8NH49 305 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 IL1F10Q8WWZ1 152 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 TAF15Q92804 592 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH13-204ENST00000539548 C14orf144Q96I85 54 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 OR51I2Q9H344 312 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 TMEM9BQ9NQ34 198 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 SLC39A9Q9NUM3 307 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 PPP1R3CQ9UQK1 317 aa8.19□□□□□ -1.1
CDH13-204ENST00000539548 SMCO3A2RU48 225 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 LILRA1O75019 489 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 LY86O95711 162 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 CLDN18P56856 261 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 SRYQ05066 204 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 SSPNQ14714 243 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 TMEM14EPQ6UXP3 125 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 ZNF497Q6ZNH5 498 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 REC114Q7Z4M0 266 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 TMEM183AQ8IXX5 376 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 RPP25LQ8N5L8 163 aaKnown RBP8.18□□□□□ -1.1
CDH13-204ENST00000539548 OR5R1Q8NH85 324 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 LHX4Q969G2 390 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 S100PBPQ96BU1 408 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 PACRGQ96M98 296 aaPredicted RBP8.18□□□□□ -1.1
CDH13-204ENST00000539548 RBKSQ9H477 322 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 PRSS50Q9UI38 385 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 SIT1Q9Y3P8 196 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 ESPL1Q14674 2120 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 ARGFXA6NJG6 315 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 B4E171 279 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 TMEM250H0YL14 139 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 J3QT63 122 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 DVL1O14640 695 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 SYNGR4O95473 234 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 TSPAN7P41732 249 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 MEF2BQ02080 365 aaPredicted RBP8.18□□□□□ -1.1
CDH13-204ENST00000539548 SLC38A11Q08AI6 406 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 SPANXN5Q5MJ07 72 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 BEND4Q6ZU67 534 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 TGIF2LYQ8IUE0 185 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 RNASEH2CQ8TDP1 164 aaKnown RBP8.18□□□□□ -1.1
CDH13-204ENST00000539548 FAM122AQ96E09 287 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 SMIM7Q9BQ49 75 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 FAM173AQ9BQD7 235 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 UFSP2Q9NUQ7 469 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 KMT2EQ8IZD2 1858 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 DOCK10Q96BY6 2186 aa8.18□□□□□ -1.1
CDH13-204ENST00000539548 RNF212BA8MTL3 300 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 RHBDL1O75783 438 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 KBTBD11O94819 623 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 CFIP05156 583 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 PAX1P15863 534 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 ZNF16P17020 682 aaPredicted RBP8.17□□□□□ -1.1
CDH13-204ENST00000539548 DDTP30046 118 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 HOXA6P31267 233 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 IL2RGP31785 369 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 WNT5AP41221 380 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 ADIRFQ15847 76 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 ATP6V1FQ16864 119 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 BSXQ3C1V8 233 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 COA6Q5JTJ3 125 aaKnown RBP8.17□□□□□ -1.1
CDH13-204ENST00000539548 NCR3LG1Q68D85 454 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 SPINK14Q6IE38 97 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 C16orf82Q7Z2V1 217 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 FGFRL1Q8N441 504 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 DRAM1Q8N682 238 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 OR2M7Q8NG81 312 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 PCSK5Q92824 1860 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 APH1AQ96BI3 265 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 SNX22Q96L94 193 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 PIEZO1Q92508 2521 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 TSTD3H0UI37 97 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 IGKV1D-33P01593 117 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 IGKV1-33P01594 117 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 CA6P23280 308 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 PSMB3P49720 205 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 ELLP55199 621 aaPredicted RBP8.17□□□□□ -1.1
CDH13-204ENST00000539548 SSTP61278 116 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 TNFRSF9Q07011 255 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 JOSD1Q15040 202 aaPredicted RBP8.17□□□□□ -1.1
CDH13-204ENST00000539548 OR51G1Q8NGK1 321 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 RHOVQ96L33 236 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms