RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 MOSP00540 346 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 IGHG2P01859 326 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 ARSBP15848 533 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 CD1BP29016 333 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
RAB40B-202ENST00000538809 TMEM50BP56557 158 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 HTD2P86397 168 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 UBE2UQ5VVX9 321 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 FOXB2Q5VYV0 432 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 SVOPQ8N4V2 548 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 ABHD14AQ9BUJ0 271 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 PLGRKTQ9HBL7 147 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 AURKAIP1Q9NWT8 199 aaPredicted RBP11.81□□□□□ -0.52
RAB40B-202ENST00000538809 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
RAB40B-202ENST00000538809 TRBV6-6A0A0A6YYG2 114 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 TRAV1-2A0A0B4J238 106 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 TRDV1A0A1B0GX56 115 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 TXNL1O43396 289 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 YPEL1O60688 119 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 GPR12P47775 334 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 CLDN12P56749 244 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 RPL23AP62750 156 aaKnown RBP11.8□□□□□ -0.52
RAB40B-202ENST00000538809 LSAMPQ13449 338 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 RAB11BQ15907 218 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 ETV3LQ6ZN32 361 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 FOXRED2Q8IWF2 684 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 STPG2Q8N412 459 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 OR51D1Q8NGF3 324 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 SETD6Q8TBK2 473 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 FAM3DQ96BQ1 224 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 YPEL2Q96QA6 119 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 CHMP1AQ9HD42 196 aaPredicted RBP11.8□□□□□ -0.52
RAB40B-202ENST00000538809 PLSCR3Q9NRY6 295 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 LIN7CQ9NUP9 197 aaKnown RBP11.8□□□□□ -0.52
RAB40B-202ENST00000538809 NECAP2Q9NVZ3 263 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 HSF4Q9ULV5 492 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 V9GY05 133 aa11.8□□□□□ -0.52
RAB40B-202ENST00000538809 NUDT19A8MXV4 375 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 LANCL1O43813 399 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 GALP22466 123 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 F2RL1P55085 397 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 SLC35B1P78383 322 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 C8orf86Q6ZUL3 223 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 SPARTQ8N0X7 666 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 WFDC9Q8NEX5 89 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 MRAPQ8TCY5 172 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 S1PR3Q99500 378 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 HSPB9Q9BQS6 159 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 URM1Q9BTM9 101 aaKnown RBP11.79□□□□□ -0.52
RAB40B-202ENST00000538809 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
RAB40B-202ENST00000538809 YTHDF1Q9BYJ9 559 aaKnown RBP11.79□□□□□ -0.52
RAB40B-202ENST00000538809 ABCG5Q9H222 651 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 PLEKHJ1Q9NW61 149 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 LRRC42Q9Y546 428 aa11.79□□□□□ -0.52
RAB40B-202ENST00000538809 TMEM272A0A1B0GTI8 110 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 AP4M1O00189 453 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 SLC2A2P11168 524 aaPredicted RBP11.78□□□□□ -0.52
RAB40B-202ENST00000538809 OR3A3P47888 321 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 PSMD7P51665 324 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 OR10A3P58181 314 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 C2orf76Q3KRA6 126 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 REC114Q7Z4M0 266 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 LINC00482Q8N8I6 264 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 IL1F10Q8WWZ1 152 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 GALMQ96C23 342 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 RASL11BQ9BPW5 248 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 HDHD3Q9BSH5 251 aaPredicted RBP11.78□□□□□ -0.52
RAB40B-202ENST00000538809 STEAP1Q9UHE8 339 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 AK3Q9UIJ7 227 aa11.78□□□□□ -0.52
RAB40B-202ENST00000538809 SAA2-SAA4A0A096LPE2 208 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 SAA2P0DJI9 122 aaPredicted RBP11.77□□□□□ -0.53
RAB40B-202ENST00000538809 VEGFCP49767 419 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 MMDQ15546 238 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 PLAC9Q5JTB6 97 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 HES5Q5TA89 166 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 NR2C2APQ86WQ0 139 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 FAM71E2Q8N5Q1 922 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 RCC1LQ96I51 464 aaKnown RBP11.77□□□□□ -0.53
RAB40B-202ENST00000538809 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 DUX3Q96PT4 197 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 PECRQ9BY49 303 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 RIMS4Q9H426 269 aaPredicted RBP11.77□□□□□ -0.53
RAB40B-202ENST00000538809 Q9H521 79 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 ABRACLQ9P1F3 81 aa11.77□□□□□ -0.53
RAB40B-202ENST00000538809 IFITM5A6NNB3 132 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 PDCD5O14737 125 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 RGS11O94810 467 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 RPLP1P05386 114 aaKnown RBP11.76□□□□□ -0.53
RAB40B-202ENST00000538809 CNTFRP26992 372 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 THBS3P49746 956 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 ZNF833PQ6ZTB9 187 aa11.76□□□□□ -0.53
RAB40B-202ENST00000538809 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
RAB40B-202ENST00000538809 OR2AK2Q8NG84 335 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms