RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 Q6ZRM9 215 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 C1orf174Q8IYL3 243 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 PRR7Q8TB68 274 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 ARPC5LQ9BPX5 153 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 LYNX1G3V0Z9 82 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 CDS2O95674 445 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 LYNX1P0DP58 116 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 CASP6P55212 293 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 CLLU1Q5K131 121 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
ACTN1-205ENST00000538545 MOB1BQ7L9L4 216 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 BVESQ8NE79 360 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 FAM234AQ9H0X4 552 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 IL19Q9UHD0 177 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 PSG11Q9UQ72 335 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 RCL1Q9Y2P8 373 aaKnown RBP11.76□□□□□ -0.53
ACTN1-205ENST00000538545 HCFC1P51610 2035 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 S100A1P23297 94 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 UQCRFS1P47985 274 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 RAB14P61106 215 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 ZNRD1Q9P1U0 126 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 ODAMA1E959 279 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 UCP1P25874 307 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 RPL12P30050 165 aaKnown RBP11.75□□□□□ -0.53
ACTN1-205ENST00000538545 NHLH2Q02577 135 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 ST6GALNAC3Q8NDV1 305 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 RFNGQ9Y644 331 aa11.75□□□□□ -0.53
ACTN1-205ENST00000538545 H3BP45 60 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 C15orf65H3BRN8 121 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 ZNF816Q0VGE8 651 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-205ENST00000538545 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 RBPMSQ93062 196 aaKnown RBP11.74□□□□□ -0.53
ACTN1-205ENST00000538545 TMEM56Q96MV1 263 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 TMEM56-RWDD3S4R434 201 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 SSSCA1O60232 199 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 FCN3O75636 299 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 LY6HO94772 140 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 SERPINE2P07093 398 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 ZNF134P52741 427 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 RND3P61587 244 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 MZT1Q08AG7 82 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
ACTN1-205ENST00000538545 FAM24AA6NFZ4 105 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 K7N7A8 449 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 LGALS8O00214 317 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 SLC31A2O15432 143 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 FBXO24O75426 580 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 MMP23AO75900 390 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 TMEM50AO95807 157 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 LYL1P12980 280 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 TMEM33P57088 247 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 CA5BP1Q8WTZ4 195 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 SAP30LQ9HAJ7 183 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 FBXL17Q9UF56 701 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 ITGB1BP2Q9UKP3 347 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 H0Y980 276 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 NMSQ5H8A3 153 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 NCMAPQ5T1S8 102 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-205ENST00000538545 FAM185AQ8N0U4 392 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 OR10Z1Q8NGY1 313 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 RNASE11Q8TAA1 199 aaKnown RBP11.73□□□□□ -0.53
ACTN1-205ENST00000538545 NINJ1Q92982 152 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 LINC00862A6NCI5 91 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 LINC00473A8K010 186 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 I3L521 148 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 CFHR2P36980 270 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 GATA4P43694 442 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 BRWD1-AS2P59051 145 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 SMCO1Q147U7 214 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 Q3ZCU0 254 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 RNASE6Q93091 150 aaKnown RBP11.73□□□□□ -0.53
ACTN1-205ENST00000538545 SNX22Q96L94 193 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 PRORYQ9H606 182 aa11.73□□□□□ -0.53
ACTN1-205ENST00000538545 CSMD2Q7Z408 3487 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 C17orf98A8MV24 154 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 PROP1O75360 226 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms