RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TRIQKQ629K1 86 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 DHRS7BQ6IAN0 325 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 ACP7Q6ZNF0 438 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SLC25A26Q70HW3 274 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 HSD17B13Q7Z5P4 300 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 LYG1Q8N1E2 194 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SCCPDHQ8NBX0 429 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 OR51T1Q8NGJ9 327 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SMIM12Q96EX1 92 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 S100A16Q96FQ6 103 aaKnown RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 ADTRPQ96IZ2 230 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 DERL3Q96Q80 235 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF436Q9C0F3 470 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 MAGT1Q9H0U3 335 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 MSL2Q9HCI7 577 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 AMBNQ9NP70 447 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 C1RLQ9NZP8 487 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 FRRS1LQ9P0K9 344 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 HSF4Q9ULV5 492 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 LINC00312Q9Y6C7 94 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 URGCP-MRPS24S4R325 110 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 CHD6Q8TD26 2715 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 KIAA1549Q9HCM3 1950 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 RNF212BA8MTL3 300 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 F5H5P2 479 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 K7EQM0 130 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 PDCD6O75340 191 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 RP2O75695 350 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 HAND1O96004 215 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 PMP2P02689 132 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 TBPP20226 339 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 GABRR1P24046 479 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 CFPP27918 469 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SOX2P48431 317 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 RAB11AP62491 216 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SPOCK1Q08629 439 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF146Q15072 292 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 GUCA2BQ16661 112 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SNAI3Q3KNW1 292 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SLC35E4Q6ICL7 350 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ASCL4Q6XD76 172 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 C5orf24Q7Z6I8 188 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 TRAPPC6BQ86SZ2 158 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 BOLLQ8N9W6 283 aaKnown RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 OR2AE1Q8NHA4 323 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 C8orf46Q8TAG6 207 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 GPX8Q8TED1 209 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF431Q8TF32 576 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 APH1BQ8WW43 257 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 CFHR4Q92496 578 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 NOL4LQ96MY1 436 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 SLIRPQ9GZT3 109 aaKnown RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 MMP28Q9H239 520 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 LAMA3Q16787 3333 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 INTS1Q8N201 2190 aaKnown RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 C20orf202A1L168 122 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 TRDCB7Z8K6 153 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 GABRPO00591 440 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 CCL25O15444 150 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SSNA1O43805 119 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 IFNA17P01571 189 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 MBPP02686 304 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 RPA2P15927 270 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 SRD5A1P18405 259 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 COL8A1P27658 744 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ETV6P41212 452 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 INPP1P49441 399 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 PPT1P50897 306 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF154Q13106 437 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 MSMO1Q15800 293 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 PDLIM3Q53GG5 364 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 WDR25Q64LD2 544 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 XAF1Q6GPH4 301 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 FAM71F2Q6NXP2 309 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 WDR82Q6UXN9 313 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF788Q6ZQV5 615 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 TCTEX1D1Q8N7M0 179 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 C8orf31Q8N9H6 132 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 OR8U1Q8NH10 309 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 CLDND2Q8NHS1 167 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 TMEM203Q969S6 136 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF286AQ9HBT8 521 aa3□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF107Q9UII5 783 aaPredicted RBP3□□□□□ -1.93
PTPN22-211ENST00000538253 IGHV2-70DA0A0C4DH43 119 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 CEACAM18A8MTB9 384 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
PTPN22-211ENST00000538253 CDIPTO14735 213 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 SPRY1O43609 319 aaPredicted RBP2.99□□□□□ -1.93
PTPN22-211ENST00000538253 LALBAP00709 142 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 HPXP02790 462 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 WNT2P09544 360 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 FAM157CP0CG43 387 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 KIR2DS2P43631 304 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 OR3A1P47881 315 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 RAB5CP51148 216 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 CD81P60033 236 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 SEC61A1P61619 476 aaKnown RBP2.99□□□□□ -1.93
PTPN22-211ENST00000538253 MFGE8Q08431 387 aaPredicted RBP2.99□□□□□ -1.93
PTPN22-211ENST00000538253 RAB31Q13636 194 aa2.99□□□□□ -1.93
PTPN22-211ENST00000538253 ARFRP1Q13795 201 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms