RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PITPNAQ00169 270 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PNLIPRP3Q17RR3 467 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ZNF260Q3ZCT1 412 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 HACD4Q5VWC8 232 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C11orf88Q6PI97 169 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TRAT1Q6PIZ9 186 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 LAX1Q8IWV1 398 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 IZUMO1Q8IYV9 350 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 KLHDC1Q8N7A1 406 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 OR9G1Q8NH87 305 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 RFESDQ8TAC1 157 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 SETD6Q8TBK2 473 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 SERTAD4Q9NUC0 356 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 KCNIP1Q9NZI2 227 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 IGHV3-7P01780 117 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CD24P25063 80 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PRRX1P54821 245 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 GNG2P59768 71 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 FBLN7Q53RD9 439 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 Q6ZS46 218 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MOB1BQ7L9L4 216 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 DTX3Q8N9I9 347 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 LEAP2Q969E1 77 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CREB3L1Q96BA8 519 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 HDHD3Q9BSH5 251 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MMP28Q9H239 520 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MIXL1Q9H2W2 232 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 RAB9BQ9NP90 201 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MBNL3Q9NUK0 354 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 EXTL2Q9UBQ6 330 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MGAT4AQ9UM21 535 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TRBV6-6A0A0A6YYG2 114 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 J3QR06 171 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ORC5O43913 435 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 S100A5P33763 92 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TAS2R20P59543 309 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 BLCAPP62952 87 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 HERPUD1Q15011 391 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 LTC4SQ16873 150 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TPTE2P1Q5T6R2 138 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 HIST2H2BDQ6DRA6 164 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ZNF554Q86TJ5 538 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 AUNIPQ9H7T9 357 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PSG11Q9UQ72 335 aa14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MRPS7Q9Y2R9 242 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PLXNB1O43157 2135 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 SPINT2O43291 252 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TSPAN15O95858 294 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CEACAM3P40198 252 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 OR10A7Q8NGE5 316 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CFHR4Q92496 578 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ARL11Q969Q4 196 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 DIRAS2Q96HU8 199 aa14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ELF5Q9UKW6 265 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C12orf77C9JDV5 145 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C15orf65H3BRN8 121 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 FCGR3AP08637 254 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 VSIG10L2P0DP72 767 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 BRS3P32247 399 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ZNF880Q6PDB4 577 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CNIH2Q6PI25 160 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C11orf44Q8N8P7 122 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 NUDCD2Q8WVJ2 157 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PRSS22Q9GZN4 317 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TAF9BQ9HBM6 251 aa14.29□□□□□ -0.12
TNFRSF1A-209ENST00000536717 OOSP1A8MZH6 123 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 DTYMKP23919 212 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 GNG10P50151 68 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 ARHGDIBP52566 201 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CNPY1Q3B7I2 92 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PRR18Q8N4B5 295 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 UBALD1Q8TB05 177 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 WIPF2Q8TF74 440 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 Q9N2K0 584 aa14.28□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TPPPO94811 219 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 HLA-DQB1P01920 261 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 PRSS3P35030 304 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MADCAM1Q13477 382 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 DIAPH2-AS1Q14236 149 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TMEM95Q3KNT9 176 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CCDC144NLQ6NUI1 221 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 Q6ZPA2 131 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C16orf82Q7Z2V1 217 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 SNX29P2Q8IUI4 249 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 RPEQ96AT9 228 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 SLC25A33Q9BSK2 321 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 WNT10AQ9GZT5 417 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 RABL2AQ9UBK7 228 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 RABL2BQ9UNT1 228 aa14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 AMMECR1Q9Y4X0 333 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-209ENST00000536717 NOTCH3Q9UM47 2321 aa14.27□□□□□ -0.13
TNFRSF1A-209ENST00000536717 A0A1W2PPE3 182 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 HBZP02008 142 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 PTHLHP12272 177 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 TNFSF8P32971 234 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 LOXL3P58215 753 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 HLA-DRB3P79483 266 aa14.26□□□□□ -0.13
TNFRSF1A-209ENST00000536717 KIR2DS1Q14954 304 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms