RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PARP12Q9H0J9 701 aaKnown RBP11.31□□□□□ -0.6
UBE3B-206ENST00000536398 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 PLSCR3Q9NRY6 295 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 LINC00527Q9UJ94 153 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 JPT1Q9UK76 154 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 IFITM5A6NNB3 132 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 NCBP2LA6PVI3 153 aaKnown RBP11.3□□□□□ -0.6
UBE3B-206ENST00000536398 M0QZK8 103 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 PDCD5O14737 125 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 YPEL1O60688 119 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 RAB3BP20337 219 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 MYL9P24844 172 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 CD1BP29016 333 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 OR3A3P47888 321 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 PSMD7P51665 324 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 F2RL1P55085 397 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 CD83Q01151 205 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 NDUFA11Q86Y39 141 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 RITA1Q96K30 269 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 YPEL2Q96QA6 119 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 TXNL4BQ9NX01 149 aaKnown RBP11.3□□□□□ -0.6
UBE3B-206ENST00000536398 RAB22AQ9UL26 194 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 HSF4Q9ULV5 492 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 KCNK7Q9Y2U2 307 aa11.3□□□□□ -0.6
UBE3B-206ENST00000536398 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 FGF16O43320 207 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 LANCL1O43813 399 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 SCTP09683 121 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 SLC2A2P11168 524 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-206ENST00000536398 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 Q8N9W7 124 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 OR2T10Q8NGZ9 312 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 MRPL20Q9BYC9 149 aaKnown RBP11.29□□□□□ -0.6
UBE3B-206ENST00000536398 OR51E2Q9H255 320 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 Q9N2K0 584 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 ABRACLQ9P1F3 81 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 OR1A1Q9P1Q5 309 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
UBE3B-206ENST00000536398 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 MOSP00540 346 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 OPN1MWP04001 364 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 OPN1MW2P0DN77 364 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 OPN1MW3P0DN78 364 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 GALP22466 123 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 LSAMPQ13449 338 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 OR56B1Q8NGI3 324 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 R3HDM4Q96D70 268 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
UBE3B-206ENST00000536398 RNF167Q9H6Y7 350 aa11.28□□□□□ -0.6
UBE3B-206ENST00000536398 A0A075B6Q4 140 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 IGKV1-6A0A0C4DH72 117 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 G3V4G9 280 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 RGS11O94810 467 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-206ENST00000536398 GNB3P16520 340 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 FGF9P31371 208 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-206ENST00000536398 CEACAM6P40199 344 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 HLA-DRB3P79483 266 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 NEDD8Q15843 81 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 OR2AK2Q8NG84 335 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 MAFIPQ8WZ33 124 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 S1PR3Q99500 378 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-206ENST00000536398 SLC23A1Q9UHI7 598 aa11.27□□□□□ -0.61
UBE3B-206ENST00000536398 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-206ENST00000536398 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 SERPINE3A8MV23 424 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 RAB27BO00194 218 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 TXNL1O43396 289 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 IGHG2P01859 326 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 CLEC2LP0C7M8 214 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 GADD45AP24522 165 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 CNTFRP26992 372 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 GPR12P47775 334 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 OR10R2Q8NGX6 335 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 ABHD14BQ96IU4 210 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 CHCHD6Q9BRQ6 235 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
UBE3B-206ENST00000536398 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 RNF150Q9ULK6 438 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 SSR3Q9UNL2 185 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
UBE3B-206ENST00000536398 PRKDCP78527 4128 aaKnown RBP11.25□□□□□ -0.61
UBE3B-206ENST00000536398 NOTOA8MTQ0 251 aa11.25□□□□□ -0.61
UBE3B-206ENST00000536398 MFNGO00587 321 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms