RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CHD3Q12873 2000 aaKnown RBP11.25□□□□□ -0.61
VPS33B-202ENST00000535906 A0A1B0GW64 132 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 FOLR2P14207 255 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 OMGP23515 440 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 CEACAM6P40199 344 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 EIF2S3P41091 472 aaKnown RBP11.25□□□□□ -0.61
VPS33B-202ENST00000535906 HOXA1P49639 335 aaPredicted RBP11.25□□□□□ -0.61
VPS33B-202ENST00000535906 BAXQ07812 192 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 FIP1L1Q6UN15 594 aaKnown RBP11.25□□□□□ -0.61
VPS33B-202ENST00000535906 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 OR5C1Q8NGR4 320 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 OR2G3Q8NGZ4 309 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
VPS33B-202ENST00000535906 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 PPP1R3CQ9UQK1 317 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 RP1L1Q8IWN7 2480 aaPredicted RBP11.25□□□□□ -0.61
VPS33B-202ENST00000535906 PTPRZ1P23471 2315 aaPredicted RBP11.24□□□□□ -0.61
VPS33B-202ENST00000535906 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 PTBP3O95758 552 aaKnown RBP11.24□□□□□ -0.61
VPS33B-202ENST00000535906 TMEM50AO95807 157 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 AESQ08117 197 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 AWAT1Q58HT5 328 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 S100PBPQ96BU1 408 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 EGLN1Q9GZT9 426 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 SLC35B3Q9H1N7 401 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 RPS10P5Q9NQ39 176 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 RBM7Q9Y580 266 aaKnown RBP11.24□□□□□ -0.61
VPS33B-202ENST00000535906 MAP1BP46821 2468 aaKnown RBP11.24□□□□□ -0.61
VPS33B-202ENST00000535906 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
VPS33B-202ENST00000535906 CHST1O43916 411 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 IGKV1-39P01597 117 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 IGKV1D-39P04432 117 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 SERPINE2P07093 398 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 WNT2P09544 360 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 PPP1CCP36873 323 aaKnown RBP11.24□□□□□ -0.61
VPS33B-202ENST00000535906 ZNF83P51522 516 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 DYNLT3P51808 116 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 FAM169BQ8N8A8 192 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 SMDT1Q9H4I9 107 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 WASF3Q9UPY6 502 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 RNF115Q9Y4L5 304 aa11.24□□□□□ -0.61
VPS33B-202ENST00000535906 EPHA1P21709 976 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 FAM53AQ6NSI3 398 aaPredicted RBP11.23□□□□□ -0.61
VPS33B-202ENST00000535906 OR1L1Q8NH94 360 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 C14orf79Q96F83 325 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 COQ2Q96H96 371 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 KCNJ16Q9NPI9 418 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 KCNS2Q9ULS6 477 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 A0A1B0GWJ7 208 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 TMEM30CPA0ZSE6 113 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 C7orf77A4D0Y5 90 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 C12orf77C9JDV5 145 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 WRBO00258 174 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 CST7O76096 145 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 SLC25A6P12236 298 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 AKR1C3P42330 323 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 OR3A1P47881 315 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 C1orf185Q5T7R7 199 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 Q6ZRM9 215 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 DUSP13Q9UII6 198 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
VPS33B-202ENST00000535906 A0A1B0GU03 582 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 M0R1B8 84 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 SNRNP70P08621 437 aaKnown RBP11.22□□□□□ -0.61
VPS33B-202ENST00000535906 PAX9P55771 341 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 TIMM23BQ5SRD1 257 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 SLC35E4Q6ICL7 350 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
VPS33B-202ENST00000535906 KCNIP1Q9NZI2 227 aa11.22□□□□□ -0.61
VPS33B-202ENST00000535906 A0A1B0GV50 99 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 BTBD17A6NE02 478 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 M0R036 132 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 CRYABP02511 175 aaKnown RBP11.21□□□□□ -0.61
VPS33B-202ENST00000535906 ZNF16P17020 682 aaPredicted RBP11.21□□□□□ -0.61
VPS33B-202ENST00000535906 TIMP3P35625 211 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 COL10A1Q03692 680 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 ZNF585BQ52M93 769 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 C1orf174Q8IYL3 243 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 GALMQ96C23 342 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 ESRP2Q9H6T0 727 aaKnown RBP11.21□□□□□ -0.61
VPS33B-202ENST00000535906 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.61
VPS33B-202ENST00000535906 KIAA1324LA8MWY0 1029 aaPredicted RBP11.21□□□□□ -0.61
VPS33B-202ENST00000535906 GPR37O15354 613 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 GABRA2P47869 451 aa11.21□□□□□ -0.61
VPS33B-202ENST00000535906 AKR1D1P51857 326 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms