RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TOMM40LQ969M1 308 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 APH1AQ96BI3 265 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 ABHD14BQ96IU4 210 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 RNF2Q99496 336 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 RPRMQ9NS64 109 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 DMDP11532 3685 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 LOC102725191A0A1B0GVB3 256 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 G3V3Y1 287 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 CST7O76096 145 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 BLVRBP30043 206 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-210ENST00000534405 MPLP40238 635 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 HNRNPA3P51991 378 aaKnown RBP16.39■□□□□ 0.21
SMPD1-210ENST00000534405 RSPO1Q2MKA7 263 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-210ENST00000534405 LHFPL4Q7Z7J7 247 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 UCN2Q96RP3 112 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 CST9LQ9H4G1 147 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 SLC2A9Q9NRM0 540 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 F5H5K5 113 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 WDR1O75083 606 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 IGLV3-1P01715 115 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 IGLC2P0DOY2 106 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 IGLC3P0DOY3 106 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 AADACP22760 399 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 GRB2P62993 217 aaKnown RBP16.39■□□□□ 0.21
SMPD1-210ENST00000534405 LYSMD4Q5XG99 296 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 Q6ZVH6 145 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 CALHM1Q8IU99 346 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 ZNF709Q8N972 641 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 RPUSD4Q96CM3 377 aaKnown RBP16.39■□□□□ 0.21
SMPD1-210ENST00000534405 ANXA10Q9UJ72 324 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 TP53TG3Q9ULZ0 132 aa16.39■□□□□ 0.21
SMPD1-210ENST00000534405 SSSCA1O60232 199 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 CCL3P10147 92 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 KISS1Q15726 138 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 PROK2Q9HC23 129 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 HYPMO75409 117 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 LINC00310P59036 64 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 SPATA45Q537H7 98 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 Q6ZN92 141 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 C1orf174Q8IYL3 243 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 TMEM217Q8N7C4 229 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 OR5L1Q8NGL2 311 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 NABP1Q96AH0 204 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 GPR146Q96CH1 333 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 TUBG2Q9NRH3 451 aa16.38■□□□□ 0.21
SMPD1-210ENST00000534405 MCTS1Q9ULC4 181 aaKnown RBP16.38■□□□□ 0.21
SMPD1-210ENST00000534405 DUXBA0A1W2PPF3 345 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 NKX2-6A6NCS4 301 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 FAHP16930 419 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 MSR1P21757 451 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 CTSSP25774 331 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 FGF8P55075 233 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-210ENST00000534405 EXT1Q16394 746 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 HLA-BQ31612 363 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 LDLRAD2Q5SZI1 272 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 TMEM144Q7Z5S9 345 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 OR5AU1Q8NGC0 362 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 TNFRSF14Q92956 283 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 TXN2Q99757 166 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 ZNF160Q9HCG1 818 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 FRYLO94915 3013 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 MSTNO14793 375 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 TNFSF4P23510 183 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 DTYMKP23919 212 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 MRPS34P82930 218 aaKnown RBP16.37■□□□□ 0.21
SMPD1-210ENST00000534405 Q8N976 141 aa16.37■□□□□ 0.21
SMPD1-210ENST00000534405 LOC102723996A0A087X1L8 192 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 IGHV1-45A0A0A0MS14 117 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 TMEM250H0YL14 139 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 TLX3O43711 291 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 GLI4P10075 376 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 BMI1P35226 326 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 SUMO1P63165 101 aaKnown RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 RHOGP84095 191 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 PHLDA2Q53GA4 152 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 ZNF837Q96EG3 531 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 SMIM12Q96EX1 92 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 PHF1O43189 567 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 ZIC3O60481 467 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 PDGFBP01127 241 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 NBEAP1P0C6P0 100 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 MEF2BQ02080 365 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 ZNF154Q13106 437 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 C10orf128Q5T292 105 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 PLPPR1Q8TBJ4 325 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 TMEM54Q969K7 222 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 LOXL4Q96JB6 756 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 IMMP1LQ96LU5 166 aa16.36■□□□□ 0.21
SMPD1-210ENST00000534405 ZNF703Q9H7S9 590 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 RBM7Q9Y580 266 aaKnown RBP16.36■□□□□ 0.21
SMPD1-210ENST00000534405 A0A0U1RQK1 487 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 ZNF320A2RRD8 509 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 MSMO1Q15800 293 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 RAET1LQ5VY80 246 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 SUMF1Q8NBK3 374 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 TM2D1Q9BX74 207 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 NXT1Q9UKK6 140 aaKnown RBP16.35■□□□□ 0.21
SMPD1-210ENST00000534405 RNF24Q9Y225 148 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 MRPS16Q9Y3D3 137 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms