RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CLCC1Q96S66 551 aa9.22□□□□□ -0.93
SVIP-205ENST00000533774 SLA2Q9H6Q3 261 aa9.22□□□□□ -0.93
SVIP-205ENST00000533774 WARS2Q9UGM6 360 aaKnown RBP9.22□□□□□ -0.93
SVIP-205ENST00000533774 TAGLN3Q9UI15 199 aa9.22□□□□□ -0.93
SVIP-205ENST00000533774 ST3GAL6Q9Y274 331 aa9.22□□□□□ -0.93
SVIP-205ENST00000533774 HSPG2P98160 4391 aa9.21□□□□□ -0.93
SVIP-205ENST00000533774 ZAR1LA6NP61 321 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 AIPO00170 330 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 RBMXL2O75526 392 aaKnown RBP9.21□□□□□ -0.94
SVIP-205ENST00000533774 CDRT1O95170 752 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 CSTBP04080 98 aaKnown RBP9.21□□□□□ -0.94
SVIP-205ENST00000533774 RBM11P57052 281 aaKnown RBP9.21□□□□□ -0.94
SVIP-205ENST00000533774 ALKBH1Q13686 389 aaKnown RBP9.21□□□□□ -0.94
SVIP-205ENST00000533774 RSU1Q15404 277 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 SYT6Q5T7P8 510 aaPredicted RBP9.21□□□□□ -0.94
SVIP-205ENST00000533774 STEAP3Q658P3 488 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 FAM131AQ6UXB0 335 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 ZNF833PQ6ZTB9 187 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 GID4Q8IVV7 300 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 PRR18Q8N4B5 295 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 OR52L2PQ8NGH6 319 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 OR4K15Q8NH41 348 aa9.21□□□□□ -0.94
SVIP-205ENST00000533774 PARP12Q9H0J9 701 aaKnown RBP9.21□□□□□ -0.94
SVIP-205ENST00000533774 C13orf42A0A1B0GVH6 325 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 A0A1W2PP11 408 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 TFAP2AP05549 437 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 RCC1P18754 421 aaPredicted RBP9.2□□□□□ -0.94
SVIP-205ENST00000533774 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
SVIP-205ENST00000533774 SSBP2P81877 361 aaPredicted RBP9.2□□□□□ -0.94
SVIP-205ENST00000533774 TNFRSF9Q07011 255 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 NHLRC3Q5JS37 347 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 ATAD3CQ5T2N8 411 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 FAM220AQ7Z4H9 259 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 LYG2Q86SG7 212 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 OR5T1Q8NG75 326 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 OR2K2Q8NGT1 345 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 ABHD14AQ9BUJ0 271 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 KLK5Q9Y337 293 aaPredicted RBP9.2□□□□□ -0.94
SVIP-205ENST00000533774 SELENOKQ9Y6D0 94 aa9.2□□□□□ -0.94
SVIP-205ENST00000533774 SAA2-SAA4A0A096LPE2 208 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 MSGN1A6NI15 193 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 SPINT2O43291 252 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 SAA2P0DJI9 122 aaPredicted RBP9.19□□□□□ -0.94
SVIP-205ENST00000533774 CCR9P51686 369 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 ZNF343Q6P1L6 599 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 ZNF529Q6P280 563 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 GLDNQ6ZMI3 551 aaPredicted RBP9.19□□□□□ -0.94
SVIP-205ENST00000533774 LAX1Q8IWV1 398 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 PARP16Q8N5Y8 322 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 POC5Q8NA72 575 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 OR52N1Q8NH53 320 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 PELI1Q96FA3 418 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 FAM192AQ9GZU8 254 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 ZNF355PQ9NSJ1 428 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 SLC2A8Q9NY64 477 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 RNF150Q9ULK6 438 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 DHDHQ9UQ10 334 aa9.19□□□□□ -0.94
SVIP-205ENST00000533774 FADS2O95864 444 aaKnown RBP9.18□□□□□ -0.94
SVIP-205ENST00000533774 CA2P00918 260 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 HTR1AP08908 422 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 CT45A6P0DMU7 189 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 CT45A5P0DMU8 189 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 CT45A7P0DMV0 189 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 PLGLAQ15195 96 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 DEFB114Q30KQ6 69 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 WFDC3Q8IUB2 231 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 SERPINA12Q8IW75 414 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 GAPTQ8N292 157 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 OR5D14Q8NGL3 314 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 NEK7Q8TDX7 302 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 WDR89Q96FK6 387 aaPredicted RBP9.18□□□□□ -0.94
SVIP-205ENST00000533774 GPER1Q99527 375 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 OR2S2Q9NQN1 319 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 RCC2Q9P258 522 aaKnown RBP9.18□□□□□ -0.94
SVIP-205ENST00000533774 PEF1Q9UBV8 284 aaKnown RBP9.18□□□□□ -0.94
SVIP-205ENST00000533774 TRAPPC2LQ9UL33 140 aa9.18□□□□□ -0.94
SVIP-205ENST00000533774 OR2A4O95047 310 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 SERPINA2P20848 420 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 PSG5Q15238 335 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 GUCA2BQ16661 112 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 TMEM30BQ3MIR4 351 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 MOGAT2Q3SYC2 334 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 GRPEL2Q8TAA5 225 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
SVIP-205ENST00000533774 DNAJC9Q8WXX5 260 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 CCDC124Q96CT7 223 aaKnown RBP9.17□□□□□ -0.94
SVIP-205ENST00000533774 MRPS24Q96EL2 167 aaKnown RBP9.17□□□□□ -0.94
SVIP-205ENST00000533774 GGTLC1Q9BX51 225 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 PRRG3Q9BZD7 231 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 IFI27L2Q9H2X8 130 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 TAF9BQ9HBM6 251 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 ZC4H2Q9NQZ6 224 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 NDE1Q9NXR1 346 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 IL36GQ9NZH8 169 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 METTL1Q9UBP6 276 aaKnown RBP9.17□□□□□ -0.94
SVIP-205ENST00000533774 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
SVIP-205ENST00000533774 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms