RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PRSS48Q7RTY5 328 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 STPG2Q8N412 459 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 Q8N9W7 124 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 KLHL30-AS1Q8NEE0 82 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 OR2AK2Q8NG84 335 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 OR51D1Q8NGF3 324 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 MRAPQ8TCY5 172 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 GFI1Q99684 422 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 TM2D1Q9BX74 207 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 LPAR5Q9H1C0 372 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 ABCG5Q9H222 651 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 LIN7CQ9NUP9 197 aaKnown RBP8.24□□□□□ -1.09
CAPN1-225ENST00000533704 NECAP2Q9NVZ3 263 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 PRKDCP78527 4128 aaKnown RBP8.24□□□□□ -1.09
CAPN1-225ENST00000533704 AP4M1O00189 453 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 SLC17A2O00624 439 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 ST8SIA5O15466 376 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 LANCL1O43813 399 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 PSMA1P25786 263 aaKnown RBP8.23□□□□□ -1.09
CAPN1-225ENST00000533704 VEGFCP49767 419 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF137PP52743 207 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 RAB25P57735 213 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 HTD2P86397 168 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 MMDQ15546 238 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 HMGN3Q15651 99 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 HES5Q5TA89 166 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 FOXB2Q5VYV0 432 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 STEAP3Q658P3 488 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 LCNL1Q6ZST4 164 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 OR2W3Q7Z3T1 314 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF554Q86TJ5 538 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 SVOPQ8N4V2 548 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 HSPB9Q9BQS6 159 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 HDHD3Q9BSH5 251 aaPredicted RBP8.23□□□□□ -1.09
CAPN1-225ENST00000533704 ISYNA1Q9NPH2 558 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 PLSCR3Q9NRY6 295 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 AURKAIP1Q9NWT8 199 aaPredicted RBP8.23□□□□□ -1.09
CAPN1-225ENST00000533704 STEAP1Q9UHE8 339 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 AK3Q9UIJ7 227 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 BLOC1S6Q9UL45 172 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 LRRC42Q9Y546 428 aa8.23□□□□□ -1.09
CAPN1-225ENST00000533704 SAA2-SAA4A0A096LPE2 208 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 HSPA12AO43301 675 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 YPEL1O60688 119 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ATP6V1G2O95670 118 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 NAPSAO96009 420 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 SAA2P0DJI9 122 aaPredicted RBP8.22□□□□□ -1.09
CAPN1-225ENST00000533704 VDAC1P21796 283 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 SOX6P35712 828 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 PNLIPRP3Q17RR3 467 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 CXorf66Q5JRM2 361 aaPredicted RBP8.22□□□□□ -1.09
CAPN1-225ENST00000533704 TEX38Q6PEX7 206 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 Q6ZPA2 131 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 MOB1BQ7L9L4 216 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF367Q7RTV3 350 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 REC114Q7Z4M0 266 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 COMMD1Q8N668 190 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 WFDC9Q8NEX5 89 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 OR8H1Q8NGG4 311 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 FAM3DQ96BQ1 224 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ARHGAP5-AS1Q96IT6 56 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 DUX3Q96PT4 197 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 YPEL2Q96QA6 119 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 NABP2Q9BQ15 211 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF251Q9BRH9 671 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ACOT13Q9NPJ3 140 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 SLC23A1Q9UHI7 598 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF107Q9UII5 783 aaPredicted RBP8.22□□□□□ -1.09
CAPN1-225ENST00000533704 V9GY05 133 aa8.22□□□□□ -1.09
CAPN1-225ENST00000533704 DENRO43583 198 aaKnown RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 CD37P11049 281 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 MYL9P24844 172 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 CNTFRP26992 372 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 HOXD3P31249 432 aaPredicted RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 THBS3P49746 956 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 ACTBP60709 375 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 HLA-DRB3P79483 266 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 TBCEQ15813 527 aaPredicted RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 C2orf76Q3KRA6 126 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 RPL39P5Q59GN2 51 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 FAM131AQ6UXB0 335 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 GLDNQ6ZMI3 551 aaPredicted RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 ETV3LQ6ZN32 361 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 ZNF833PQ6ZTB9 187 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 ZNF695Q8IW36 515 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 MRPL41Q8IXM3 137 aaKnown RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 FAM71E2Q8N5Q1 922 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 ABHD14BQ96IU4 210 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 RITA1Q96K30 269 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 CMSS1Q9BQ75 279 aaKnown RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 PARP12Q9H0J9 701 aaKnown RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 IFI27L2Q9H2X8 130 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 RIMS4Q9H426 269 aaPredicted RBP8.21□□□□□ -1.1
CAPN1-225ENST00000533704 ZFP57Q9NU63 452 aa8.21□□□□□ -1.1
CAPN1-225ENST00000533704 OR1A1Q9P1Q5 309 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms