RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 VGLL3A8MV65 326 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 CLDN34H7C241 214 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 SULT1C2O00338 296 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 BAMBIQ13145 260 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 MADCAM1Q13477 382 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 PRIMA1Q86XR5 153 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 GPX8Q8TED1 209 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 DIRAS2Q96HU8 199 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 OR1A1Q9P1Q5 309 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 ANXA10Q9UJ72 324 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 ANAPC10Q9UM13 185 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 POMT1Q9Y6A1 747 aa13.31□□□□□ -0.28
PACSIN3-210ENST00000533686 SLC31A2O15432 143 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 HSPA12AO43301 675 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 LPLP06858 475 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 IL3RAP26951 378 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 CEACAM6P40199 344 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 IER3P46695 156 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 ZNF137PP52743 207 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 SSX2Q16385 188 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 IGSF11Q5DX21 431 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 TPTE2P1Q5T6R2 138 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 SNX29P2Q8IUI4 249 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 GVQW1Q8N7I0 195 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 ZDHHC22Q8N966 263 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 BEST4Q8NFU0 473 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 OR2AK2Q8NG84 335 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 OR10J5Q8NHC4 309 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 ABHD14AQ9BUJ0 271 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 DPAGT1Q9H3H5 408 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 ESM1Q9NQ30 184 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 HILPDAQ9Y5L2 63 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 CUBNO60494 3623 aa13.3□□□□□ -0.28
PACSIN3-210ENST00000533686 BET1O15155 118 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 VENTXO95231 258 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 NAT1P18440 290 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 TNFSF8P32971 234 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 RAB7AP51149 207 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 DYNLT3P51808 116 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 LRRC75BQ2VPJ9 315 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 PYHIN1Q6K0P9 492 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 CCDC144NLQ6NUI1 221 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 OR5R1Q8NH85 324 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 FAM216AQ8WUB2 273 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 GCDHQ92947 438 aaPredicted RBP13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 ST6GALNAC6Q969X2 333 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 RPEQ96AT9 228 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 ABHD1Q96SE0 405 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 GHITMQ9H3K2 345 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 IFT46Q9NQC8 304 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 RDH8Q9NYR8 311 aa13.29□□□□□ -0.28
PACSIN3-210ENST00000533686 DNAJC9-AS1A6NH13 148 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 S100A5P33763 92 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 MRPS10P82664 201 aaKnown RBP13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 ZNF816Q0VGE8 651 aaPredicted RBP13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 SLC9A3R2Q15599 337 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 SNAPC3Q92966 411 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 TOMM40LQ969M1 308 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 SSX3Q99909 188 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 SOSTQ9BQB4 213 aa13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 C11orf54Q9H0W9 315 aaPredicted RBP13.28□□□□□ -0.28
PACSIN3-210ENST00000533686 C2CD3Q4AC94 2353 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 CTDSPLO15194 276 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 IGHV4-59P01825 116 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 GAPDHP04406 335 aaKnown RBP13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 PAX6P26367 422 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 ARPC4P59998 168 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 H1FOOQ8IZA3 346 aaPredicted RBP13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 OR8H3Q8N146 312 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 OR5AP2Q8NGF4 316 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 ZFAND2BQ8WV99 257 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 GINS4Q9BRT9 223 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 AGMATQ9BSE5 352 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 PARP12Q9H0J9 701 aaKnown RBP13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 IFI27L2Q9H2X8 130 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 PIPOXQ9P0Z9 390 aa13.27□□□□□ -0.29
PACSIN3-210ENST00000533686 BTBD17A6NE02 478 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 FABP12A6NFH5 140 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 GABARAPH6UMI1 98 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 TRIM77I1YAP6 450 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 HSD17B6O14756 317 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 LANCL1O43813 399 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 RNASE1P07998 156 aaKnown RBP13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 BRS3P32247 399 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 RCVRNP35243 200 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 IL18Q14116 193 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 ODF3L1Q8IXM7 274 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 LYG1Q8N1E2 194 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 PIFOQ8TCI5 191 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 ABCB10Q9NRK6 738 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 NECAP2Q9NVZ3 263 aa13.26□□□□□ -0.29
PACSIN3-210ENST00000533686 H3BUX3 64 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms