RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 NIT1Q86X76 327 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 DEFB124Q8NES8 71 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 OR4X1Q8NH49 305 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 ISOC2Q96AB3 205 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 HARBI1Q96MB7 349 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SIGMAR1Q99720 223 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 PRR13Q9NZ81 148 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 FAM90A26D6RGX4 464 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 DNASE2O00115 360 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 TSPAN2O60636 221 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 HSPB1P04792 205 aaKnown RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 PSG2P11465 335 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 ZNF788Q6ZQV5 615 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SFRP2Q96HF1 295 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SNX22Q96L94 193 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 MS4A7Q9GZW8 240 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 NPVFQ9HCQ7 196 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 TUBD1Q9UJT1 453 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 GPR132Q9UNW8 380 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SIRT4Q9Y6E7 314 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 TRBV5-7A0A0A0MS05 114 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 NTN1O95631 604 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 HBZP02008 142 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 APCSP02743 223 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 VSIG10L2P0DP72 767 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 QSER1Q2KHR3 1735 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 WDFY1Q8IWB7 410 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 GCSAMQ8N6F7 178 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM52Q8NDY8 209 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 RND1Q92730 232 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 STARD4Q96DR4 205 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 UCN2Q96RP3 112 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 P2RX4Q99571 388 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SLC25A33Q9BSK2 321 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 FUT9Q9Y231 359 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 A0A1W2PQF6 199 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 MGST3O14880 152 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 KCNAB3O43448 404 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 IGKV1D-16P01601 117 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 G6PCP35575 357 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SELENOTP62341 195 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 ABHD3Q8WU67 409 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 ZNF501Q96CX3 271 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM222Q9H0R3 208 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SRD5A3Q9H8P0 318 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 HSF4Q9ULV5 492 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 KLHDC2Q9Y2U9 406 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 INSIG2Q9Y5U4 225 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 FAM90A27PA6NNH2 459 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 F2RL2O00254 374 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 NMBP08949 121 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 DCAF10Q5QP82 559 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SFTPA2Q8IWL1 248 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SFTPA1Q8IWL2 248 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SAXO1Q8IYX7 474 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SSMEM1Q8WWF3 244 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 NAGKQ9UJ70 344 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 DTX4Q9Y2E6 619 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 CHTOPQ9Y3Y2 248 aaKnown RBP6.09□□□□□ -1.43
CTNND1-236ENST00000533667 TRAV34A0A0B4J273 112 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 J3KRW8 73 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 J3QR06 171 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 IFNL4K9M1U5 179 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 CCL4P13236 92 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 CXCL2P19875 107 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 GCSHP23434 173 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 MGAT2Q10469 447 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 P2RY6Q15077 328 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM30BQ3MIR4 351 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 UNQ9370/PRO34162Q6UXP9 181 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SMRP1Q8NCR6 262 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 AQP10Q96PS8 301 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 KCNK17Q96T54 332 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 COA4Q9NYJ1 87 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 WIPI2Q9Y4P8 454 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 A0A1B0GW15 77 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SNURFLB1AK76 121 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 M0R296 226 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 IGHV4-34P06331 123 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SLC25A47Q6Q0C1 308 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM251Q8N6I4 163 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 OR13C6PQ8NH95 151 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 ZPLD1Q8TCW7 415 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 AQP3Q92482 292 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 SNRNP40Q96DI7 357 aaKnown RBP6.09□□□□□ -1.43
CTNND1-236ENST00000533667 NPDC1Q9NQX5 325 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-236ENST00000533667 WASHC3Q9Y3C0 194 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 OR51B2Q9Y5P1 312 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 KNL1Q8NG31 2342 aa6.09□□□□□ -1.43
CTNND1-236ENST00000533667 IGLV1-36A0A0B4J1U3 117 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 NPIPB13A6NJU9 1138 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 NPIPB4C9JG80 1138 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 MELTFP08582 738 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 FABP2P12104 132 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 SUCLG1P53597 346 aaKnown RBP6.09□□□□□ -1.44
CTNND1-236ENST00000533667 SIGLEC14Q08ET2 396 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 DNLZQ5SXM8 178 aa6.09□□□□□ -1.44
CTNND1-236ENST00000533667 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms