RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HES1Q14469 280 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 MORN2Q502X0 79 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 MOB1BQ7L9L4 216 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 MOB3BQ86TA1 216 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 C11orf44Q8N8P7 122 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 OR52L2PQ8NGH6 319 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 SETD6Q8TBK2 473 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 RTN4IP1Q8WWV3 396 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-210ENST00000532935 GALMQ96C23 342 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 ARHGAP5-AS1Q96IT6 56 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-210ENST00000532935 PECRQ9BY49 303 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 RIMS4Q9H426 269 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-210ENST00000532935 SSR3Q9UNL2 185 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 MOB4Q9Y3A3 225 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 A3GALT2U3KPV4 340 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 TRBV6-6A0A0A6YYG2 114 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 M0QZK8 103 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 PEX14O75381 377 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 IGKV1D-33P01593 117 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 IGKV1-33P01594 117 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 AMY1AP04745 511 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 AMY2AP04746 511 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 TMEM11P17152 192 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 PPP1CCP36873 323 aaKnown RBP12.25□□□□□ -0.45
CPSF1-210ENST00000532935 SERPINB10P48595 397 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 ZNF137PP52743 207 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 PLAC9Q5JTB6 97 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 STEAP3Q658P3 488 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 NR2C2APQ86WQ0 139 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 ABHD14AQ9BUJ0 271 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 WNT10AQ9GZT5 417 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 ABRACLQ9P1F3 81 aa12.25□□□□□ -0.45
CPSF1-210ENST00000532935 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 A0A0B4J203 849 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 SMIM30A4D0T7 59 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-210ENST00000532935 YPEL1O60688 119 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 RGS11O94810 467 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 LPLP06858 475 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 RAB6AP20340 208 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 HNF4GQ14541 408 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 SPCS2Q15005 226 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 C2orf68Q2NKX9 166 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 LY6G6FQ5SQ64 297 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 IZUMO1Q8IYV9 350 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 LYG1Q8N1E2 194 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 WIPF2Q8TF74 440 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-210ENST00000532935 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 YPEL2Q96QA6 119 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 OR51E2Q9H255 320 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 C12orf4Q9NQ89 552 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 MEGF8Q7Z7M0 2845 aa12.24□□□□□ -0.45
CPSF1-210ENST00000532935 NOTOA8MTQ0 251 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 TXNL1O43396 289 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 FBXO24O75426 580 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 TSPAN15O95858 294 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 SLC2A2P11168 524 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-210ENST00000532935 ZNF182P17025 639 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-210ENST00000532935 CD1BP29016 333 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 VBP1P61758 197 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 EBI3Q14213 229 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 MOGAT2Q3SYC2 334 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 TPRA1Q86W33 373 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 TGIF2LXQ8IUE1 241 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 DYNC2LI1Q8TCX1 351 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 CMSS1Q9BQ75 279 aaKnown RBP12.23□□□□□ -0.45
CPSF1-210ENST00000532935 DCSTAMPQ9H295 470 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 MMP27Q9H306 513 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 CCDC59Q9P031 241 aaKnown RBP12.23□□□□□ -0.45
CPSF1-210ENST00000532935 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
CPSF1-210ENST00000532935 LANCL1O43813 399 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 CSF1P09603 554 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 CD28P10747 220 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 NCS1P62166 190 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 HLA-DRB3P79483 266 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 ODF3L1Q8IXM7 274 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 Q8N6K4 173 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 C5orf56Q8N8D9 126 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 OR10R2Q8NGX6 335 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 OR2T10Q8NGZ9 312 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 PTX4Q96A99 478 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 EAF1Q96JC9 268 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-210ENST00000532935 KCTD7Q96MP8 289 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 CHCHD6Q9BRQ6 235 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 DCUN1D5Q9BTE7 237 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 Q9N2K0 584 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 KCNK7Q9Y2U2 307 aa12.22□□□□□ -0.45
CPSF1-210ENST00000532935 LOC100506127A0A0U1RQW1 187 aa12.21□□□□□ -0.45
CPSF1-210ENST00000532935 ZNF736B4DX44 427 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-210ENST00000532935 RAB27BO00194 218 aa12.21□□□□□ -0.45
CPSF1-210ENST00000532935 FGF16O43320 207 aa12.21□□□□□ -0.45
CPSF1-210ENST00000532935 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.45
CPSF1-210ENST00000532935 CENPOQ9BU64 300 aa12.21□□□□□ -0.45
CPSF1-210ENST00000532935 RNF167Q9H6Y7 350 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms