RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 C1QTNF12Q5T7M4 302 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 SPACA3Q8IXA5 215 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 STPG3Q8N7X2 389 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 TMEM45BQ96B21 275 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 NPAS1Q99742 590 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 NTN1O95631 604 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 RPL27AP46776 148 aaKnown RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 OR4D11Q8NGI4 311 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 MRPL13Q9BYD1 178 aaKnown RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 DOK5Q9P104 306 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 TRBV5-3A0A0A0MS03 114 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 WNT9BO14905 357 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 CRYBB2P43320 205 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 TNFSF10P50591 281 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 OR2C3Q8N628 320 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 FAM168AQ92567 244 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 SLC35B3Q9H1N7 401 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 ZNF703Q9H7S9 590 aaPredicted RBP9.29□□□□□ -0.92
COLCA1-203ENST00000532918 CHST1O43916 411 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 SSX1Q16384 188 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 MIDNQ504T8 468 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 OR5C1Q8NGR4 320 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 VSIG4Q9Y279 399 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 C9orf170A2RU37 121 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 GNG4P50150 75 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 RAG2P55895 527 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 FGF12P61328 243 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 HIST3H3Q16695 136 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 CXorf66Q5JRM2 361 aaPredicted RBP9.29□□□□□ -0.92
COLCA1-203ENST00000532918 DPPA3Q6W0C5 159 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 IDI2-AS1Q9NZ38 188 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 FOCADQ5VW36 1801 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 DUXBA0A1W2PPF3 345 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 EMP1P54849 157 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 RNFT1Q5M7Z0 435 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 WDFY2Q96P53 400 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 PRDM14Q9GZV8 571 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 SOX21Q9Y651 276 aaPredicted RBP9.29□□□□□ -0.92
COLCA1-203ENST00000532918 ARFGEF1Q9Y6D6 1849 aa9.29□□□□□ -0.92
COLCA1-203ENST00000532918 FFAR1O14842 300 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 NEURL1O76050 574 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 KIR3DL2P43630 455 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 CENPVQ7Z7K6 275 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 MYPOPQ86VE0 399 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 GAPTQ8N292 157 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 YAE1D1Q9NRH1 226 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR51B2Q9Y5P1 312 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 J3QR06 171 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 CRISP2P16562 243 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 GLRXP35754 106 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 FHITP49789 147 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 ST3GAL2Q16842 350 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 SPINK9Q5DT21 86 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 EIF4E3Q8N5X7 224 aaKnown RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 TRAF4Q9BUZ4 470 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 SCN10AQ9Y5Y9 1956 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 CRXO43186 299 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 TIAF1O95411 115 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 HERVK_113P61574 105 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 UNQ5815/PRO19632Q6UWF5 114 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 WFDC3Q8IUB2 231 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR10G4Q8NGN3 311 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR10G9Q8NGN4 311 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR10G7Q8NGN6 311 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 KLF14Q8TD94 323 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 PTX4Q96A99 478 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 SOCS1O15524 211 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 WISP3O95389 354 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 PRSS1P07477 247 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 PIGYQ3MUY2 71 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR52B4Q8NGK2 314 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR10AC1Q8NH08 325 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 RBM14Q96PK6 669 aaKnown RBP9.28□□□□□ -0.92
COLCA1-203ENST00000532918 METTL26Q96S19 204 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 CCL28Q9NRJ3 127 aa9.28□□□□□ -0.92
COLCA1-203ENST00000532918 OR9G1Q8NH87 305 aa9.27□□□□□ -0.92
COLCA1-203ENST00000532918 METTL1Q9UBP6 276 aaKnown RBP9.27□□□□□ -0.92
COLCA1-203ENST00000532918 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.92
COLCA1-203ENST00000532918 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.92
COLCA1-203ENST00000532918 COL4A1P02462 1669 aa9.27□□□□□ -0.92
COLCA1-203ENST00000532918 A0A1B0GU03 582 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 MAP1LC3B2A6NCE7 125 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 DHRS7CA6NNS2 312 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 CTDSPLO15194 276 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 MBPP02686 304 aaPredicted RBP9.27□□□□□ -0.93
COLCA1-203ENST00000532918 CD1AP06126 327 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 NPY1RP25929 384 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 DHRS2Q13268 280 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 RRN3P1Q2M238 152 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 ANKRD55Q3KP44 614 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 COX19Q49B96 90 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms