RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 IGHV1-3A0A0C4DH29 117 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 TRDCB7Z8K6 153 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 FAM106CPP0CH98 169 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 IL3RAP26951 378 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 REG1BP48304 166 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 VBP1P61758 197 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 BLCAPP62952 87 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 ODF3L1Q8IXM7 274 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 Q8N2B8 174 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 OR56B4Q8NH76 319 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 CAPSLQ8WWF8 208 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 RTN4IP1Q8WWV3 396 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-209ENST00000532725 RBM14Q96PK6 669 aaKnown RBP15.89■□□□□ 0.13
CPSF1-209ENST00000532725 NAA50Q9GZZ1 169 aaKnown RBP15.89■□□□□ 0.13
CPSF1-209ENST00000532725 SIGLEC9Q9Y336 463 aa15.89■□□□□ 0.13
CPSF1-209ENST00000532725 IGKV1-6A0A0C4DH72 117 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 SCGNO76038 276 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 FCGR3AP08637 254 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 KRTAP10-3P60369 221 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 MRPS15P82914 257 aaKnown RBP15.88■□□□□ 0.13
CPSF1-209ENST00000532725 CTF1Q16619 201 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 ZNF260Q3ZCT1 412 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 HACD4Q5VWC8 232 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 SHISA2Q6UWI4 295 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 C16orf82Q7Z2V1 217 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 MOB3BQ86TA1 216 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 OR4C13Q8NGP0 309 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 WFDC12Q8WWY7 111 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 SLC25A46Q96AG3 418 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 ABHD14AQ9BUJ0 271 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 ZNF702PQ9H963 129 aa15.88■□□□□ 0.13
CPSF1-209ENST00000532725 ZNF230Q9UIE0 474 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-209ENST00000532725 OR2F2O95006 317 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 SNRNP70P08621 437 aaKnown RBP15.87■□□□□ 0.13
CPSF1-209ENST00000532725 ZBTB25P24278 435 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 CEACAM6P40199 344 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 SERPINB10P48595 397 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 SRSF4Q08170 494 aaKnown RBP15.87■□□□□ 0.13
CPSF1-209ENST00000532725 ARFRP1Q13795 201 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 EBI3Q14213 229 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 SRSF7Q16629 238 aaKnown RBP eCLIP15.87■□□□□ 0.13
CPSF1-209ENST00000532725 Q6ZS46 218 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 LYG1Q8N1E2 194 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 DTX3Q8N9I9 347 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 SLC25A33Q9BSK2 321 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 OR1A1Q9P1Q5 309 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 SLC23A1Q9UHI7 598 aa15.87■□□□□ 0.13
CPSF1-209ENST00000532725 ITGB1BP1O14713 200 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 LANCL1O43813 399 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 GABARAPO95166 117 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 AMY1AP04745 511 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 AMY2AP04746 511 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 GSTP1P09211 210 aaKnown RBP15.86■□□□□ 0.13
CPSF1-209ENST00000532725 GSTT2P0CG29 244 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 GSTT2BP0CG30 244 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 HERPUD1Q15011 391 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 GPR107Q5VW38 600 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 Q6ZS49 121 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 OR2AK2Q8NG84 335 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 OR4A4PQ8NGN8 299 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 AGMATQ9BSE5 352 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 PRSS22Q9GZN4 317 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 PARP12Q9H0J9 701 aaKnown RBP15.86■□□□□ 0.13
CPSF1-209ENST00000532725 IFI27L2Q9H2X8 130 aa15.86■□□□□ 0.13
CPSF1-209ENST00000532725 A0A0A6YYH2 397 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 A6NJ64 397 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 HAX1O00165 279 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 FABP7O15540 132 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 IGKV1D-33P01593 117 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 IGKV1-33P01594 117 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 CD1BP29016 333 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 TALDO1P37837 337 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 KIR2DS1Q14954 304 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 PNLIPRP3Q17RR3 467 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 GPR141Q7Z602 305 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 TGIF2LXQ8IUE1 241 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 OR2T6Q8NHC8 308 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 MAFIPQ8WZ33 124 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 AKR1E2Q96JD6 320 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 TOLLIPQ9H0E2 274 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 C11orf54Q9H0W9 315 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-209ENST00000532725 ABCG5Q9H222 651 aa15.85■□□□□ 0.13
CPSF1-209ENST00000532725 TRAV18A0A075B6X5 111 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 IGKV1D-8A0A087WSZ0 117 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 IGHV3-72A0A0B4J1Y9 119 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 TMEM235A6NFC5 223 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 ZNF736B4DX44 427 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-209ENST00000532725 ST8SIA5O15466 376 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 HSPA12AO43301 675 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 TXNL1O43396 289 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 DTYMKP23919 212 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 OR3A3P47888 321 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 PITPNAQ00169 270 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 HNF4GQ14541 408 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 IGSF11Q5DX21 431 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 ZNF833PQ6ZTB9 187 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 ZNF251Q9BRH9 671 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 DCSTAMPQ9H295 470 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 DIABLOQ9NR28 239 aa15.84■□□□□ 0.13
CPSF1-209ENST00000532725 SERTAD4Q9NUC0 356 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms