RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CHMP1AQ9HD42 196 aaPredicted RBP11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 RAB18Q9NP72 206 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 PITPNC1Q9UKF7 332 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 RNF114Q9Y508 228 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 ETV7Q9Y603 341 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 HSD17B6O14756 317 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 GAPDHP04406 335 aaKnown RBP11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 FCGR3AP08637 254 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 MNDAP41218 407 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 REG1BP48304 166 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 VBP1P61758 197 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 Q6ZS49 121 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 OR56B4Q8NH76 319 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 SETD6Q8TBK2 473 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 RBMXL1Q96E39 390 aaKnown RBP11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 RBM14Q96PK6 669 aaKnown RBP11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 SERTAD4Q9NUC0 356 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 ABRACLQ9P1F3 81 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 ZNF230Q9UIE0 474 aaPredicted RBP11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
TSPAN4-220ENST00000532375 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 A0A075B6Q4 140 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 ITGB1BP1O14713 200 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 SSX5O60225 188 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 PROP1O75360 226 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 GABARAPO95166 117 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 SNRNP70P08621 437 aaKnown RBP11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 CD3GP09693 182 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 GSTT2P0CG29 244 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 GSTT2BP0CG30 244 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 SRSF7Q16629 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 CROCCP3Q8IVE0 287 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 Q8N6K4 173 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 WIPF2Q8TF74 440 aaPredicted RBP11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 SLC25A46Q96AG3 418 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 ABHD14AQ9BUJ0 271 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 NPFFR1Q9GZQ6 430 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 IFI27L2Q9H2X8 130 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 MGAT4AQ9UM21 535 aa11.12□□□□□ -0.63
TSPAN4-220ENST00000532375 LANCL1O43813 399 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 OR2F2O95006 317 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 ZNF833PQ6ZTB9 187 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 C16orf82Q7Z2V1 217 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 LYG1Q8N1E2 194 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 OR4C13Q8NGP0 309 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 CAPSLQ8WWF8 208 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 MAFIPQ8WZ33 124 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 CITED1Q99966 193 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 SLC25A33Q9BSK2 321 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 C11orf54Q9H0W9 315 aaPredicted RBP11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 ABCG5Q9H222 651 aa11.11□□□□□ -0.63
TSPAN4-220ENST00000532375 TRBV6-7A0A0A0MS04 114 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 IGHV3-72A0A0B4J1Y9 119 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 FABP7O15540 132 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 SCGNO76038 276 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 RGS11O94810 467 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 DTYMKP23919 212 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 CD1BP29016 333 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 CEACAM6P40199 344 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 OR3A3P47888 321 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 SERPINB10P48595 397 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 ARHGDIBP52566 201 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 ARL6IP1Q15041 203 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 MOB3BQ86TA1 216 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 TGIF2LXQ8IUE1 241 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 IZUMO1Q8IYV9 350 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 OR4A4PQ8NGN8 299 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 EAF1Q96JC9 268 aaPredicted RBP11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 NABP2Q9BQ15 211 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 PLSCR3Q9NRY6 295 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 SLC23A1Q9UHI7 598 aa11.1□□□□□ -0.63
TSPAN4-220ENST00000532375 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 A0A0A6YYH2 397 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 A6NJ64 397 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 DIRAS3O95661 229 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 IGKV1D-33P01593 117 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 IGKV1-33P01594 117 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 ZBTB25P24278 435 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 IL3RAP26951 378 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 ARFRP1Q13795 201 aa11.09□□□□□ -0.63
TSPAN4-220ENST00000532375 HNF4GQ14541 408 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms