RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 LSM2Q9Y333 95 aaKnown RBP4.72□□□□□ -1.65
HMGB1P42-201ENST00000532126 TRAV8-7A0A075B6U6 113 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 A0A0G2JK05 382 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MDFIC2A0A1B0GVS7 189 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 hADV38S2A0JD32 116 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 FUOMA2VDF0 154 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 RNASEK-C17orf49H0YIS7 233 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 H0YIZ8 118 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 HSPB6O14558 160 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MGST3O14880 152 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 PIN1P1O15428 100 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 DENRO43583 198 aaKnown RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF780AO75290 641 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 CDRT1O95170 752 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR2H2O95918 312 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MAS1P04201 325 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 PRTN3P24158 256 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 LMO1P25800 156 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MAP2K4P45985 399 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 CDKN1BP46527 198 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 DLX1P56177 255 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 PRB3Q04118 309 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MEF2CQ06413 473 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 FOXL1Q12952 345 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MLLT11Q13015 90 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 BAMBIQ13145 260 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 GPR50Q13585 617 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 DEFB112Q30KQ8 113 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 PRAMEF5Q5TYX0 476 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 LIPKQ5VXJ0 399 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 ELP2Q6IA86 826 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 ASCL4Q6XD76 172 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 C17orf107Q6ZR85 190 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 CEACAM19Q7Z692 300 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 JAGN1Q8N5M9 183 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 Q8N7P7 452 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 BPIFCQ8NFQ6 507 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR4S1Q8NGB4 309 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR10K1Q8NGX5 313 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 TMEM203Q969S6 136 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 MGLLQ99685 303 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 NKX3-1Q99801 234 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 C19orf24Q9BVV8 132 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 ISYNA1Q9NPH2 558 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 NOX4Q9NPH5 578 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 IL36GQ9NZH8 169 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 FOXJ3Q9UPW0 622 aa4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 SOX21Q9Y651 276 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P42-201ENST00000532126 A0A1W2PRD5 423 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 A0A1W2PRF3 423 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 A0A1W2PRM7 423 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 MEX3AA1L020 520 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TMEM89A2RUT3 159 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 DNAJC9-AS1A6NH13 148 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PRSS46E5RG02 174 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 NPFFO15130 113 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 MRPS14O60783 128 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 RBP4P02753 201 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF728P0DKX0 622 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 GTF2F2P13984 249 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 CCL3L1P16619 93 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PI3P19957 117 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 SERPINA2P20848 420 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PSMA1P25786 263 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ERP29P30040 261 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 UBE2E1P51965 193 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 GABARAPL2P60520 117 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 RPS25P62851 125 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 UBA52P62987 128 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ACTG1P63261 375 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 AESQ08117 197 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 KLRD1Q13241 179 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TPBGQ13641 420 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 GPR176Q14439 515 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 INSL4Q14641 139 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TRAM1Q15629 374 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 BEAN1Q3B7T3 259 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PIGYQ3MUY2 71 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 SLC22A6Q4U2R8 563 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 HSD17B12Q53GQ0 312 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 FAM27D1Q5T7N8 215 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 Q6P435 159 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 GLIPR1L1Q6UWM5 242 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 UNQ9370/PRO34162Q6UXP9 181 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 Q6YL49 198 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF367Q7RTV3 350 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ERASQ7Z444 233 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TRAPPC6BQ86SZ2 158 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 OSR2Q8N2R0 312 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PNKDQ8N490 385 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 C11orf42Q8N5U0 333 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TPRX1Q8N7U7 411 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZDHHC22Q8N966 263 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR51T1Q8NGJ9 327 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 SPATA3Q8NHX4 192 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 CCDC107Q8WV48 283 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PHYHIPQ92561 330 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TNFRSF14Q92956 283 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF503Q96F45 646 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms