RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SAMD12Q8N8I0 201 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OR2G3Q8NGZ4 309 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CT45A3Q8NHU0 189 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 VN1R17PQ8TDU5 208 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 SLC37A2Q8TED4 501 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 DCAKDQ8WVC6 231 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 RXFP2Q8WXD0 754 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 LRRC58Q96CX6 371 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ZMYND19Q96E35 227 aaPredicted RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 SMIM8Q96KF7 97 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CCDC115Q96NT0 180 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 TBX15Q96SF7 602 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 APOOQ9BUR5 198 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 FBXL15Q9H469 300 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 REEP1Q9H902 201 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 RNF122Q9H9V4 155 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 MEPEQ9NQ76 525 aaPredicted RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ACER3Q9NUN7 267 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 RBFOX1Q9NWB1 397 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 OR51B2Q9Y5P1 312 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF780BQ9Y6R6 833 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 CHD1O14646 1710 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 GOLGA3Q08378 1498 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 BCL9LQ86UU0 1499 aa2.5□□□□□ -2.01
PTPRK-220ENST00000531466 ZNFX1Q9P2E3 1918 aaKnown RBP2.5□□□□□ -2.01
PTPRK-220ENST00000531466 KDM5DQ9BY66 1539 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 IGHV2OR16-5A0A0B4J2B6 119 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM72A0PK05 275 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 IFITM5A6NNB3 132 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 M0R1B8 84 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 M0R2Z0 102 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 DNASE2O00115 360 aaPredicted RBP2.49□□□□□ -2.01
PTPRK-220ENST00000531466 AIPO00170 330 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 UBFD1O14562 309 aaKnown RBP2.49□□□□□ -2.01
PTPRK-220ENST00000531466 HCRTR1O43613 425 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 MMP23AO75900 390 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PIAS1O75925 651 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 C6orf47O95873 294 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 FGF1P05230 155 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 FABP3P05413 133 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 HPNP05981 417 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 FCGR3AP08637 254 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 IL3P08700 152 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ADRA2AP08913 450 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PSG2P11465 335 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PVRP15151 417 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ORM2P19652 201 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TCN2P20062 427 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 MYL9P24844 172 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 OR1D4P47884 311 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TAS2R20P59543 309 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PFN3P60673 137 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PPP1CBP62140 327 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SP4Q02446 784 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF763Q0D2J5 394 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PLCXD2Q0VAA5 305 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SMAGPQ0VAQ4 97 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 INCA1Q0VD86 236 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 FZD2Q14332 565 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 GGTLC2Q14390 218 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 CLINT1Q14677 625 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 RGNQ15493 299 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 CD226Q15762 336 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 CCL15Q16663 113 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM241Q24JQ0 296 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ACOT6Q3I5F7 207 aaPredicted RBP2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SCGB2B2Q4G0G5 96 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 UNC50Q53HI1 259 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 LDLRAD2Q5SZI1 272 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 NCMAPQ5T1S8 102 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TPTE2P1Q5T6R2 138 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 WDR59Q6PJI9 974 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 GTF2H5Q6ZYL4 71 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 MOB1BQ7L9L4 216 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM150AQ86TG1 271 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 NAA40Q86UY6 237 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PPP1R27Q86WC6 154 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TGIF2LYQ8IUE0 185 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 KRTCAP2Q8N6L1 136 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TCTEX1D1Q8N7M0 179 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SLC35G3Q8N808 338 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 RELL2Q8NC24 303 aaPredicted RBP2.49□□□□□ -2.01
PTPRK-220ENST00000531466 MDS2Q8NDY4 140 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 OR2G2Q8NGZ5 317 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 OR5W2Q8NH69 310 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PIFOQ8TCI5 191 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF418Q8TF45 676 aaPredicted RBP2.49□□□□□ -2.01
PTPRK-220ENST00000531466 HIST1H2BAQ96A08 127 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 EEF1AKMT3Q96AZ1 226 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SEC22AQ96IW7 307 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 OR52B2Q96RD2 323 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TP53RKQ96S44 253 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 PITX2Q99697 317 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM121Q9BTD3 319 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SNHG12Q9BXW3 62 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SAMD10Q9BYL1 202 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 C20orf27Q9GZN8 174 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 COA1Q9GZY4 146 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 LPAR5Q9H1C0 372 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 OR51I2Q9H344 312 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms